CX290923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.057e-13 Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD--------------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 + +L++ E F+ + ++ C +GFYT DAFI+A S+P F T KRE+AAF A +HETT +C+ E++ + YC P YPCA GK Y Sbjct: 74 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQY 184
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.910e-13 Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKG-FYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 + +++ FD +K++ C+GK FY+ +AFI+A S+ FG T DT KRE+AAFFA +HETT +CF+ E YCTP+ Q+PCA G+ Y Sbjct: 78 IGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKY 188
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.910e-13 Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 77 LVTPEFFDGIKNQA-PATCEGKG-FYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 +++ FD + N C+GK FY+ +AFISA S+P FG T KRE+AAF A +HETT +CF+ E YCTP+ Q+PCA G+ Y Sbjct: 71 VISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKY 178
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.302e-12 Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 77 LVTPEFFDGIKNQA-PATCEGKG-FYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 +++ FD + N C+GK FY+ +AF++A S+P FG T KRE+AAF A +HETT +CF+ E YCTP+ Q+PCA G+ Y Sbjct: 75 VISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKY 182
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.302e-12 Identity = 43/114 (37.72%), Postives = 60/114 (52.63%), Query Frame = 2 Query: 62 NSVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETT-------------DFCFVEEISKT--NPYCTPTPQYPCANGKFY 343 + VA +V+ FD + ++ A C K FYT DAF++A +++P F T KREVAAF A +HETT +CF EE + + YC + Q+PCA GK Y Sbjct: 77 SGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKY 190
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.127e-12 Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 2 Query: 65 SVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEF---GRTDT-KREVAAFFAHVTHETT-------------DFCFVEEISKTNPYCTPTPQYPCANGKFY 343 +++ L++ + F+ +K++ C+GK FYT DAF+SA ++P F G T T KRE+AAF +HETT +CF+ E + YC + ++PCA+GK Y Sbjct: 67 TLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLRE-QNPSTYCQASSEFPCASGKQY 176
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.127e-12 Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 77 LVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETT--------------DFCFVEEISKTNPYCTPTPQYPCANGKFY 343 L+T E FD + ++ C +GFYT DAFI+A S+P F T KREVAAF A +HETT +C+ E++ + YC P YPCA GK Y Sbjct: 75 LITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YCQWDPNYPCAPGKQY 181
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11 Identity = 46/120 (38.33%), Postives = 57/120 (47.50%), Query Frame = 2 Query: 38 IPRNVVCQNSVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETT-------------DFCFVEEISKTNPYCTPTPQYPCANGKFY 343 IP V LV FD +K + C G GFYT DAFI+A S+ FG T K+E+AAF A +HETT +CFV E + YC+P +PCA GK Y Sbjct: 70 IPTPSTGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSP-KDWPCAPGKKY 188
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT---DT-KREVAAFFAHVTHETTD------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 VA +VT + F+ + ++ A C +GFY AF++A ++P F T DT KREVAAF A +H T+ +C+ E T+ +C P ++PCA GK Y Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAY 199
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT---DT-KREVAAFFAHVTHETTD------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 VA +VT + F+ + ++ A C +GFY AF++A ++P F T DT KREVAAF A +H T+ +C+ E T+ +C P ++PCA GK Y Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAY 199 The following BLAST results are available for this feature:
BLAST of CX290923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290923 ID=CX290923; Name=CX290923; organism=Citrus clementina; type=EST; length=344bpback to top |