CX290930

Overview
NameCX290930
Unique NameCX290930
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length408
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.137e-17
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 3
Query:  174 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW--EEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPN--NIKL 407
            EW L+N  K +W+R P+E+T+EEYA FY SL  D+  ++ ++  HFS EG +EFKA+LFVP +AP DL+++    N  N+KL
Sbjct:  335 EWELLNDMKAVWLRSPKEVTEEEYAKFYHSLAKDFGDDKPMSWSHFSAEGDVEFKALLFVPPKAPHDLYESYYNANKSNLKL 416          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.404e-17
Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 3
Query:  171 HEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW--EEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPN--NIKL 407
            +EW L+N  K IW+R P+E+T+EEY  FY SL+ D+  E+ +A  HF+ EG +EFKA+L+VP +AP DL+++    N  N+KL
Sbjct:  336 YEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLSKDFTDEKPMAWSHFNAEGDVEFKAVLYVPPKAPHDLYESYYNSNKANLKL 418          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HSP82_ENCCU (Heat shock protein 90 OS=Encephalitozoon cuniculi GN=HSP90 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.503e-16
Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 3
Query:  186 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            +N +KP+W R  +E+ +EE  +FYK+++ DW++ LAV  + +EG L  + ++F+PKRA FD+F+  KK NNIKL
Sbjct:  276 INVEKPLWKRNIKEVPEEELKSFYKTVSGDWDDFLAVDFWHIEGLLSIELLMFIPKRARFDMFNKNKKNNNIKL 349          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HS905_HUMAN (Putative heat shock protein HSP 90-alpha A5 OS=Homo sapiens GN=HSP90AA5P PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.606e-15
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 3
Query:  186 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLE 326
            +NK KPIW R P+ IT EEY  F++SLTN+WE+HLAVKHFSVEGQLE
Sbjct:  114 LNKTKPIWTRNPDAITNEEYGEFHQSLTNNWEDHLAVKHFSVEGQLE 160          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.606e-15
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  174 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKL 407
            +W L+N  KPIW R  +E+ ++EY AFYKS + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKL
Sbjct:  332 DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKL 411          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.606e-15
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  174 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKL 407
            +W L+N  KPIW R  +E+ ++EY AFYKS + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKL
Sbjct:  332 DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKL 411          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.606e-15
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  174 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKL 407
            +W L+N  KPIW R  +E+ ++EY AFYKS + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKL
Sbjct:  332 DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKL 411          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.606e-15
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  174 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKL 407
            +W L+N  KPIW R  +E+ ++EY AFYKS + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKL
Sbjct:  332 DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKL 411          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.606e-15
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  174 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKL 407
            +W L+N  KPIW R  +E+ ++EY AFYKS + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKL
Sbjct:  332 DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKL 411          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.606e-15
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  174 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKL 407
            +W L+N  KPIW R  +E+ ++EY AFYKS + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKL
Sbjct:  332 DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKL 411          
The following BLAST results are available for this feature:
BLAST of CX290930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
ENPL_HORVU4.137e-1748.78Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_ARATH5.404e-1748.19Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
HSP82_ENCCU3.503e-1645.95Heat shock protein 90 OS=Encephalitozoon cuniculi ... [more]
HS905_HUMAN6.606e-1572.34Putative heat shock protein HSP 90-alpha A5 OS=Hom... [more]
ENPL_RAT6.606e-1547.50Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_PONAB6.606e-1547.50Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
ENPL_MOUSE6.606e-1547.50Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
ENPL_MACFA6.606e-1547.50Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN6.606e-1547.50Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_BOVIN6.606e-1547.50Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC03001H06Rv OF1 Citrus clementina cDNA clone C03001H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290930 ID=CX290930; Name=CX290930; organism=Citrus clementina; type=EST; length=408bp
CTGAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGACCACTGAG
AAGGAGATTTCTGATGATGAGGACGAGGAAGAAAAGAAGGATGAGGAGGG
TAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAGAGAAGAAGAAGA
AGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTGAACAAGCAGAAA
CCCATTTGGATGAGGAAACCCGAGGAGATTACAAAAGAAGAGTATGCTGC
CTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACTTGGCTGTGAAGC
ACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTTTGTTCCC
AAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCAATAACAT
CAAGCTCT
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