CX290966

Overview
NameCX290966
Unique NameCX290966
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 5.626e-98
Identity = 141/151 (93.38%), Postives = 144/151 (95.36%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GA LTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTN+EIA
Sbjct:   57 ITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNEEIA 207          

HSP 2 Score: 84.7297 bits (208), Expect = 5.626e-98
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 2
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKP+IPEKYLD+KTIFHLNPS RFVIGGP GDAGLT
Sbjct:  205 EIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPDGDAGLT 250          
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 5.626e-98
Identity = 139/151 (92.05%), Postives = 143/151 (94.70%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEY ND GAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   60 ITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDGGAMVPIRVHTVLISTQHDETVTNDEIA 210          

HSP 2 Score: 89.7373 bits (221), Expect = 5.626e-98
Identity = 40/46 (86.96%), Postives = 44/46 (95.65%), Query Frame = 2
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPV+PE+YLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  208 EIAADLKEHVIKPVVPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLT 253          
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 5.626e-98
Identity = 139/151 (92.05%), Postives = 143/151 (94.70%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTK PE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC+WLRPDGKTQVTVEYYND GAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKATVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIA 207          

HSP 2 Score: 89.7373 bits (221), Expect = 5.626e-98
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 2
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIARDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250          
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 5.626e-98
Identity = 136/151 (90.07%), Postives = 144/151 (95.36%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVR+TCR IGF+SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC+WLRPDGKTQVTVEY+N+NGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANVDYEKIVRETCREIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTVEYFNENGAMVPVRVHTVLISTQHDETVTNDEIA 207          

HSP 2 Score: 91.6633 bits (226), Expect = 5.626e-98
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250          
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.340e-98
Identity = 138/151 (91.39%), Postives = 143/151 (94.70%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYE+IVRDTCRSIGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC+WLRPDGKTQVTVEYYN NGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANVDYEQIVRDTCRSIGFTSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNGNGAMVPVRVHTVLISTQHDETVTNDEIA 207          

HSP 2 Score: 90.5077 bits (223), Expect = 7.340e-98
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 2
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLK+HVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKQHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250          
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 7.341e-98
Identity = 138/151 (91.39%), Postives = 142/151 (94.04%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKI RDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANVDYEKIARDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 207          

HSP 2 Score: 91.6633 bits (226), Expect = 7.341e-98
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250          
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 9.576e-98
Identity = 138/151 (91.39%), Postives = 144/151 (95.36%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGF+SDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANVDYEKIVRDTCRNIGFISDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKQPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 207          

HSP 2 Score: 89.3521 bits (220), Expect = 9.576e-98
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 2
Query:  458 DLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            DLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  209 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250          
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.630e-97
Identity = 137/151 (90.73%), Postives = 143/151 (94.70%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDETSE MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYN+ GA VP+RVHT+LISTQHDETVTNDEIA
Sbjct:   57 ITTKAAVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETSELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEKGATVPIRVHTLLISTQHDETVTNDEIA 207          

HSP 2 Score: 90.5077 bits (223), Expect = 1.630e-97
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 2
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIP+KYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250          
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 1.630e-97
Identity = 137/151 (90.73%), Postives = 141/151 (93.38%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEY+ND GA VP+RVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANVDYEKIVRDTCREIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYHNDGGARVPIRVHTVLISTQHDETVTNDEIA 207          

HSP 2 Score: 91.6633 bits (226), Expect = 1.630e-97
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250          
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 1.630e-97
Identity = 134/151 (88.74%), Postives = 143/151 (94.70%), Query Frame = 1
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTK  +DYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRK+ TC WLRPDGKTQVT+EYYN+NGAMVP+RVHTVLISTQHDETVTND+IA
Sbjct:   24 ITTKGNIDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTIEYYNENGAMVPIRVHTVLISTQHDETVTNDKIA 174          

HSP 2 Score: 92.0485 bits (227), Expect = 1.630e-97
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            K+ ADLKEHVI+PVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  172 KIAADLKEHVIRPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 217          
The following BLAST results are available for this feature:
BLAST of CX290966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_BRAJU5.626e-9893.38S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK_DENCR5.626e-9892.05S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK1_ARATH5.626e-9892.05S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK2_BRAJU5.626e-9890.07S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK_LITCN7.340e-9891.39S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK_MESCR7.341e-9891.39S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK3_PETHY9.576e-9891.39S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK_CAMSI1.630e-9790.73S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK2_VITVI1.630e-9790.73S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK3_ACTCH1.630e-9788.74S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]

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Properties
Property NameValue
Genbank descriptionC03002C10Rv OF1 Citrus clementina cDNA clone C03002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290966 ID=CX290966; Name=CX290966; organism=Citrus clementina; type=EST; length=613bp
ATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTG
CCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACGCCGATCACT
GCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATTGCCCAGGGT
GTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCA
GGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAATTTATGCCTT
TGAGCCATGTCCTTGCCACCAAACTTGGTGCTNGTCTCACGGAGGTTAGG
AAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCAC
TGTTGAGTACTACAACGACAATGGTGCCATGGTCCCAGTCCGTGTCCACA
CGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATT
GCTTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGT
ACCTTGATGAGAAAACCATCTTCCACCTTAATCCATCANGTCGTTTTGTC
ATTGGTGGGCCTCATGGTGATGCTGGTCTCACTTGGACGTAAGATCATCA
TCGACACTTATGG
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