CX290966

Overview
NameCX290966
Unique NameCX290966
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 2.126e-97
Identity = 138/151 (91.39%), Postives = 144/151 (95.36%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHF+KRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC+WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   58 ITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 208

HSP 2 Score: 88.9669 bits (219), Expect = 2.126e-97
Identity = 40/46 (86.96%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHG++GLT
Sbjct:  206 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGESGLT 251
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.126e-97
Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTK  +DYEKIVRDTCR IGF S+DVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEY ND+GAM+PVRVHTVLISTQHDETVTNDEIA
Sbjct:   58 ITTKGNIDYEKIVRDTCRDIGFTSEDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDHGAMIPVRVHTVLISTQHDETVTNDEIA 208

HSP 2 Score: 90.1225 bits (222), Expect = 2.126e-97
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPE+YLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  206 EIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLT 251
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 2.126e-97
Identity = 138/151 (91.39%), Postives = 142/151 (94.04%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQG MFGYATDET E MPLSHVLATKLGA LTEVRKN TC+WLRPDGKTQVTVEY N+ GAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   59 ITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIA 209

HSP 2 Score: 91.6633 bits (226), Expect = 2.126e-97
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  207 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 252
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.774e-97
Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA +DYEKIVRDTCRSIGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPED+GAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC+WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTN++IA
Sbjct:   57 ITTKANIDYEKIVRDTCRSIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVTNEQIA 207

HSP 2 Score: 90.5077 bits (223), Expect = 2.774e-97
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLD+KTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 3.619e-97
Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQS DIAQGVHGHF+KRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC+WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   58 ITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSSDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIA 208

HSP 2 Score: 91.6633 bits (226), Expect = 3.619e-97
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  206 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 251
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.721e-97
Identity = 135/151 (89.40%), Postives = 143/151 (94.70%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVR+TCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA LTEVRKN TC WLRPDGKTQVT+EY+ND GAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   59 ITTKANVDYEKIVRNTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYFNDKGAMVPIRVHTVLISTQHDETVTNDEIA 209

HSP 2 Score: 90.5077 bits (223), Expect = 4.721e-97
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLK+HVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  207 EIAADLKQHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 252
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 4.721e-97
Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVR TCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH T+RPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   61 ITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIA 211

HSP 2 Score: 91.6633 bits (226), Expect = 4.721e-97
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  209 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 254
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 4.722e-97
Identity = 137/151 (90.73%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVR TCRSIGFVSDDVGLDAD C VLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANVDYEKIVRSTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYLNENGAMVPIRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 91.6633 bits (226), Expect = 4.722e-97
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 6.160e-97
Identity = 138/151 (91.39%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVR TCR IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPEDIGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYND GAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANVDYEKIVRKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 88.9669 bits (219), Expect = 6.160e-97
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKP+IP KYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPIIPAKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 6.160e-97
Identity = 135/151 (89.40%), Postives = 144/151 (95.36%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA +DYEKIVRDTCR++GFVS+DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEY+ND+GAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANLDYEKIVRDTCRAVGFVSEDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFNDHGAMVPIRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 89.3521 bits (220), Expect = 6.160e-97
Identity = 39/46 (84.78%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKP++PEK+LDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPIVPEKFLDEKTIFHLNPSGRFVIGGPHGDAGLT 250
The following BLAST results are available for this feature:
BLAST of CX290966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_POPDE2.126e-9791.39S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK_MUSAC2.126e-9790.07S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK1_TRIMO2.126e-9791.39S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK2_SUASA2.774e-9790.07S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK5_POPTR3.619e-9790.07S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK_MEDFA4.721e-9789.40S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK3_ATRNU4.721e-9790.07S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK2_POPTR4.722e-9790.73S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK2_DAUCA6.160e-9791.39S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK4_VITVI6.160e-9789.40S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionC03002C10Rv OF1 Citrus clementina cDNA clone C03002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290966 ID=CX290966; Name=CX290966; organism=Citrus clementina; type=EST; length=613bp
ATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTG
CCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACGCCGATCACT
GCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATTGCCCAGGGT
GTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCA
GGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAATTTATGCCTT
TGAGCCATGTCCTTGCCACCAAACTTGGTGCTNGTCTCACGGAGGTTAGG
AAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCAC
TGTTGAGTACTACAACGACAATGGTGCCATGGTCCCAGTCCGTGTCCACA
CGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATT
GCTTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGT
ACCTTGATGAGAAAACCATCTTCCACCTTAATCCATCANGTCGTTTTGTC
ATTGGTGGGCCTCATGGTGATGCTGGTCTCACTTGGACGTAAGATCATCA
TCGACACTTATGG
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