CX290966

Overview
NameCX290966
Unique NameCX290966
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 6.745e-96
Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVR+TCR+IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGHFTK+PE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC+WLRPDG TQVTVEYYND GAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   32 ITTKANVDYEKIVRNTCRNIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGNTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIA 182

HSP 2 Score: 86.6557 bits (213), Expect = 6.745e-96
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLD KTI HLNPS RFVIGGPHGDAGLT
Sbjct:  180 EIAADLKEHVIKPVIPEKYLDSKTICHLNPSGRFVIGGPHGDAGLT 225
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 8.797e-96
Identity = 136/151 (90.07%), Postives = 142/151 (94.04%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WL+PDGKTQVTVEY NDNGAM+P+RVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCRWLKPDGKTQVTVEYCNDNGAMIPIRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 88.1965 bits (217), Expect = 8.797e-96
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEH IKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIARDLKEHAIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 1.148e-95
Identity = 134/151 (88.74%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVR TCR IGFVS DVGLDAD+CKVLV IEQQSPDIAQGVHGH ++RPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   61 ITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIA 211

HSP 2 Score: 91.6633 bits (226), Expect = 1.148e-95
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  209 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 254
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.953e-95
Identity = 134/151 (88.74%), Postives = 142/151 (94.04%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE++GAGDQG MFGYATDET E MPL+H+LATKLGA LTEVRKN TC+WLRPDGKTQVT+EY N+ GAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   59 ITTKATVDYEKIVRDTCRDIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLTHMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIA 209

HSP 2 Score: 87.0409 bits (214), Expect = 1.953e-95
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIP KYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  207 EIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLT 252
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.953e-95
Identity = 134/151 (88.74%), Postives = 142/151 (94.04%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE++GAGDQG MFGYATDET E MPL+H+LATKLGA LTEVRKN TC+WLRPDGKTQVT+EY N+ GAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   59 ITTKATVDYEKIVRDTCRDIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLTHMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIA 209

HSP 2 Score: 87.0409 bits (214), Expect = 1.953e-95
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIP KYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  207 EIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLT 252
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.548e-95
Identity = 135/151 (89.40%), Postives = 143/151 (94.70%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE++GAGDQG MFGYATDET E MPLSHVLATKLGA LTEVRKN TC+W+RPDGKTQVTVEY N++GAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   59 ITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWVRPDGKTQVTVEYLNEDGAMVPVRVHTVLISTQHDETVTNDEIA 209

HSP 2 Score: 87.4261 bits (215), Expect = 2.548e-95
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIP KYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  207 EIAADLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLT 252
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.548e-95
Identity = 133/151 (88.08%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYE+IVR TCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA LTEVRKN TC WLRPDGKTQVT+EY N+ GAMVP RVHTVLISTQHDETVTND+IA
Sbjct:   57 ITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIA 207

HSP 2 Score: 89.7373 bits (221), Expect = 2.548e-95
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 3.324e-95
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA +DYE+IVR TCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA LTEVRKN TC WLRPDGKTQVT+EY N+ GAMVP RVHTVLISTQHDETVTND+IA
Sbjct:   57 ITTKADIDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIA 207

HSP 2 Score: 89.7373 bits (221), Expect = 3.324e-95
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 4.337e-95
Identity = 133/151 (88.08%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVR TCR IGFVS DVGLDAD+CKVLV IEQQSPDIAQGVHGH ++RPE+IGAGDQGHMFGYA+DET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   61 ITTKADVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIGAGDQGHMFGYASDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIA 211

HSP 2 Score: 91.6633 bits (226), Expect = 4.337e-95
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  209 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 254
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.256e-94
Identity = 133/151 (88.08%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYE+IVR TCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAG QGHMFGYATDET E MPL+HVLATKLGA LTEVRKN TC+WLRPDGKTQVT+EY ND GAMVP RVHTVLISTQHDETVTND+IA
Sbjct:   57 ITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGYQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTIEYRNDGGAMVPERVHTVLISTQHDETVTNDQIA 207

HSP 2 Score: 88.5817 bits (218), Expect = 1.256e-94
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLK+HVIKPVIPEKYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAADLKQHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
The following BLAST results are available for this feature:
BLAST of CX290966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_PEA6.745e-9690.07S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK_SOLBR8.797e-9690.07S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK1_ATRNU1.148e-9588.74S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK2_HORVU1.953e-9588.74S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK1_HORVU1.953e-9588.74S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK3_HORVU2.548e-9589.40S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK2_PINCO2.548e-9588.08S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK2_PICSI3.324e-9587.42S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK2_ATRNU4.337e-9588.08S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK3_PICSI1.256e-9488.08S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]

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Properties
Property NameValue
Genbank descriptionC03002C10Rv OF1 Citrus clementina cDNA clone C03002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290966 ID=CX290966; Name=CX290966; organism=Citrus clementina; type=EST; length=613bp
ATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTG
CCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACGCCGATCACT
GCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATTGCCCAGGGT
GTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCA
GGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAATTTATGCCTT
TGAGCCATGTCCTTGCCACCAAACTTGGTGCTNGTCTCACGGAGGTTAGG
AAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCAC
TGTTGAGTACTACAACGACAATGGTGCCATGGTCCCAGTCCGTGTCCACA
CGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATT
GCTTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGT
ACCTTGATGAGAAAACCATCTTCCACCTTAATCCATCANGTCGTTTTGTC
ATTGGTGGGCCTCATGGTGATGCTGGTCTCACTTGGACGTAAGATCATCA
TCGACACTTATGG
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