CX290966

Overview
NameCX290966
Unique NameCX290966
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.639e-94
Identity = 131/151 (86.75%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYE+IVR TCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE++GAGDQGHMFGYATDET E MPL+HVLATKLGA LTEVRKN TC WLRPDGKTQVT+EY N++GAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYINESGAMVPVRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 91.6633 bits (226), Expect = 1.639e-94
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 1.639e-94
Identity = 135/151 (89.40%), Postives = 141/151 (93.38%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA LTEVRKN TC WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTND+IA
Sbjct:   57 ITTKATVDYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIA 207

HSP 2 Score: 85.5001 bits (210), Expect = 1.639e-94
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKPVIP KYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 1.639e-94
Identity = 134/151 (88.74%), Postives = 141/151 (93.38%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGF+S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA LTEVRKN TC WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTND+IA
Sbjct:   57 ITTKANVDYEKIVRDTCREIGFISADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIA 207

HSP 2 Score: 85.5001 bits (210), Expect = 1.639e-94
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKPVIP KYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 8.078e-94
Identity = 134/151 (88.74%), Postives = 137/151 (90.73%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYE+IVR TCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MP  HVLATKLGA LTEVRKN TC WLRP GKTQVTVEY NDNGAMVP RVHTVLISTQHDETV NDEIA
Sbjct:   57 ITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETLELMPKCHVLATKLGAKLTEVRKNGTCPWLRPHGKTQVTVEYRNDNGAMVPERVHTVLISTQHDETVPNDEIA 207

HSP 2 Score: 87.8113 bits (216), Expect = 8.078e-94
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKPVIPEKYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAPDLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.078e-94
Identity = 133/151 (88.08%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA LTEVRKN TC WLRPDGKTQVTVEY NDNGAM+P+RVHT+LISTQHDETVTND+IA
Sbjct:   57 ITTKATVDYEKIVRDTCRGIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIA 207

HSP 2 Score: 83.5741 bits (205), Expect = 8.078e-94
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKPV+P +YLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 8.078e-94
Identity = 133/151 (88.08%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKAKVDYEKIVRDTCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HVLAT+LGA LTEVRKN TC WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDE VTN++IA
Sbjct:   57 ITTKAKVDYEKIVRDTCRGIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDEGVTNEQIA 207

HSP 2 Score: 85.5001 bits (210), Expect = 8.078e-94
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKPVIP KYLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.982e-93
Identity = 132/151 (87.42%), Postives = 139/151 (92.05%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HV ATKLGA LTEVRKN TC WLRPDGKTQVTVEY NDNGAM+P+RVHT+LISTQHDETVTND+IA
Sbjct:   57 ITTKATVDYEKIVRDTCRGIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVWATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIA 207

HSP 2 Score: 83.5741 bits (205), Expect = 3.982e-93
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKPV+P +YLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 3.982e-93
Identity = 132/151 (87.42%), Postives = 137/151 (90.73%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITT AKVDYEKIVR TCR IGF+S DVGLDAD C VLVNIEQQSPDIAQGVHGH TK+PEDIGAGDQGHMFGYATDET E MPL+HVLATKLGA LTEVRKN TC WLRPDGKTQVTVEY ND GAM+P+RVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTAAKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDGGAMIPIRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 86.2705 bits (212), Expect = 3.982e-93
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIP KYLD+ TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPAKYLDDNTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 5.195e-93
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA +DYEKIVRDTCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA LTEVRK+ TC WLRPDGKTQVTVEY N+ GAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANIDYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYKNEGGAMVPLRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 85.8853 bits (211), Expect = 5.195e-93
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPV+P +YLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVVPSQYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 5.195e-93
Identity = 133/151 (88.08%), Postives = 139/151 (92.05%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HV ATKLGA LTEVRKN TC WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTND+IA
Sbjct:   57 ITTKATVDYEKIVRDTCRGIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVWATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIA 207

HSP 2 Score: 84.3445 bits (207), Expect = 5.195e-93
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKPVIP +YLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAQDLKEHVIKPVIPSQYLDENTIFHLNPSGRFVIGGPHGDAGLT 250
The following BLAST results are available for this feature:
BLAST of CX290966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_ARATH1.639e-9486.75S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK3_SOLLC1.639e-9489.40S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK2_SOLTU1.639e-9488.74S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK_PINBN8.078e-9488.74S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK2_PETHY8.078e-9488.08S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK2_TOBAC8.078e-9488.08S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK1_PETHY3.982e-9387.42S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK3_ARATH3.982e-9387.42S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK1_PICSI5.195e-9387.42S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK1_TOBAC5.195e-9388.08S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]

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Properties
Property NameValue
Genbank descriptionC03002C10Rv OF1 Citrus clementina cDNA clone C03002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290966 ID=CX290966; Name=CX290966; organism=Citrus clementina; type=EST; length=613bp
ATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTG
CCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACGCCGATCACT
GCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATTGCCCAGGGT
GTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCA
GGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAATTTATGCCTT
TGAGCCATGTCCTTGCCACCAAACTTGGTGCTNGTCTCACGGAGGTTAGG
AAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCAC
TGTTGAGTACTACAACGACAATGGTGCCATGGTCCCAGTCCGTGTCCACA
CGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATT
GCTTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGT
ACCTTGATGAGAAAACCATCTTCCACCTTAATCCATCANGTCGTTTTGTC
ATTGGTGGGCCTCATGGTGATGCTGGTCTCACTTGGACGTAAGATCATCA
TCGACACTTATGG
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