CX290969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.389e-46 Identity = 88/164 (53.66%), Postives = 116/164 (70.73%), Query Frame = 2 Query: 38 EVSVNLTAMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 529 +V L K +N+VVIGHVD+GKST GH++Y LG I+KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD Sbjct: 246 DVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMD 409
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.038e-46 Identity = 87/164 (53.05%), Postives = 116/164 (70.73%), Query Frame = 2 Query: 38 EVSVNLTAMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 529 +V L K +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD Sbjct: 241 DVKAGLEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMD 404
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.038e-46 Identity = 87/164 (53.05%), Postives = 116/164 (70.73%), Query Frame = 2 Query: 38 EVSVNLTAMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 529 +V L K +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD Sbjct: 244 DVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMD 407
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.192e-46 Identity = 88/172 (51.16%), Postives = 117/172 (68.02%), Query Frame = 2 Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXK 577 M +K H+N+ VIGH+D GKSTT G L+++ G + +IE F KEA K SF++AWV+D LK ERERGITIDIA +F+T K+Y TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH LA TLG+ Q++ NKMDA Y + ++E+ K Sbjct: 1 MANDKPHMNLAVIGHIDHGKSTTVGRLMFETGAVPAHIIENFRKEAESKGKGSFEFAWVMDNLKEERERGITIDIAHKRFDTAKFYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQLVIAINKMDAV--NYDQKRFEEVKK 163
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.000e-45 Identity = 91/172 (52.91%), Postives = 119/172 (69.19%), Query Frame = 2 Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXK 577 M K+K +N+ IGHVD+GKSTT G L+Y G ID +++E+ ++EA E K F++A+V+D LK ERERG+TID+A KFET KY T++D PGHRDFIKNMITG SQAD AVL++D +A QTREH LA TLG+KQ+ NKMD T YS+ Y+++ K Sbjct: 1 MAKQKPVLNVAFIGHVDAGKSTTVGRLLYDSGAIDPQLLEKLKREAQERGKAGFEFAYVMDNLKEERERGVTIDVAHKKFETQKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVDVN----DAKTGIQPQTREHMFLARTLGIKQIAVAINKMD--TVNYSQEEYEKMKK 166 HSP 2 Score: 24.2534 bits (51), Expect = 1.000e-45 Identity = 8/15 (53.33%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 594 LKXGGYNPEKVPFVP 638 LK GYNP+++ F+P Sbjct: 173 LKVLGYNPDQIDFIP 187
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_METMA (Elongation factor 1-alpha OS=Methanosarcina mazei GN=tuf PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.568e-45 Identity = 92/190 (48.42%), Postives = 124/190 (65.26%), Query Frame = 2 Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXKGGLFLPEEXWIQPRESPF 631 M +K H+N+ VIGH+D GKST G L+Y G + +IE++++EA + K SF +AWV+D LK ERERGITIDIA +F+T K+Y TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA YS+A Y E+ + + + +P E PF Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTFVGRLMYDAGAVPAHIIEKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTDKFYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--DYSEARYKEVVEQVSGILKMIGFKPSEIPF 181
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.568e-45 Identity = 91/190 (47.89%), Postives = 123/190 (64.74%), Query Frame = 2 Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXKGGLFLPEEXWIQPRESPF 631 M K H+N+ VIGH+D GKSTT G ++++ G + + +++ ++KEA K +F++AWV+D LK ERERGITIDIA KFET KY TV+D PGHRDF+KNMITG SQAD A++++ T G E QT+EH L+ TLG+ Q+I NKMDA YS+ Y+E L +P E+PF Sbjct: 1 MAAAKPHMNLAVIGHIDHGKSTTVGRILFETGVVQQHILDGYKKEAESKGKATFEFAWVMDSLKEERERGITIDIAHKKFETPKYNFTVVDCPGHRDFVKNMITGASQADAAIIVVSGTEGPME-------QTKEHVFLSKTLGINQIIVAINKMDAV--NYSEEKYNEAKDKMTKLIMSVGFKPAETPF 181
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.674e-45 Identity = 92/190 (48.42%), Postives = 124/190 (65.26%), Query Frame = 2 Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXKGGLFLPEEXWIQPRESPF 631 M +K H+N+ VIGH+D GKST G L+Y G + VIE++++EA + K SF +AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+ Y E+ + + + +P + PF Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTFVGRLMYDAGAVPAHVIEKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--EYSEKRYKEVVEQVSGILKMIGFKPGDIPF 181
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.674e-45 Identity = 91/190 (47.89%), Postives = 125/190 (65.79%), Query Frame = 2 Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXKGGLFLPEEXWIQPRESPF 631 M +K H+N+ VIGH+D GKSTT G ++++ G + +IE + KEA K +F++AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH LA TLG+ Q+I NKMDA K+ + ++E+ K L + +P E+ F Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTTVGRMMFETGAVPAHIIEAYRKEAESKGKATFEFAWVMDNLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQIIIAINKMDAV--KFDEKRFNEVKKELSDLIKMVGYKPEETLF 181
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.493e-45 Identity = 85/152 (55.92%), Postives = 112/152 (73.68%), Query Frame = 2 Query: 74 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 529 K +N+VVIGHVD+GKST GHL+Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFET T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD Sbjct: 260 KQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMD 411 The following BLAST results are available for this feature:
BLAST of CX290969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290969 ID=CX290969; Name=CX290969; organism=Citrus clementina; type=EST; length=649bpback to top |