CX290979

Overview
NameCX290979
Unique NameCX290979
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.239e-14
Identity = 50/140 (35.71%), Postives = 70/140 (50.00%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNF-SVISSDEDQMAANLVKHGPVAEGINAVWMQ--TYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 405
            I+   G++ E  YPY   D  +C++D   I A+VS++    S DE  +   +   GPV+  I+A      +Y GGV     C   Y +H V  VGYG+            YWI+KNSWG  WGE+GY K+   R N C +
Sbjct:  182 IIANRGIDTESSYPYKAIDD-NCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDA------NGGDYWIVKNSWGAWWGESGYIKMARNRDNNCAI 314          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.924e-14
Identity = 51/145 (35.17%), Postives = 72/145 (49.66%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVI-SSDEDQMAANLVKHGPVAEGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 420
            + K  G++ E  YPY G D  +C ++ +  AA    +  I   +E  +   + + GPV+  I+A     Q Y  GV     C    L+H VL VGYG         K K +WIIKNSWGENWG  GY  +   + N CG+ ++ S
Sbjct:  190 VQKNRGIDSEDAYPYVGQDE-NCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.924e-14
Identity = 47/148 (31.76%), Postives = 73/148 (49.32%), Query Frame = 1
Query:   16 GVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISS-----DEDQMAANLVKHGPVAEGI----------NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 414
            G+  E  +PYTGTD   CK  +       S +  +       +E  M   LV HGP+A             N ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG +WGE+GY++I  G + C ++S+
Sbjct:  315 GLVEEACFPYTGTDS-PCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVYHGPLAVAFEVYDDFLHYQNGIYHHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGTSWGEDGYFRIRRGTDECAIESI 453          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.819e-14
Identity = 47/148 (31.76%), Postives = 71/148 (47.97%), Query Frame = 1
Query:   16 GVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISS-----DEDQMAANLVKHGPVAEGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 414
            G+  E  +PYTGTD   CK  +       S +  +       +E  M   LV HGP+A               ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG  WGENGY++I  G + C ++S+
Sbjct:  315 GLVEEACFPYTGTDS-PCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGTGWGENGYFRIRRGTDECAIESI 453          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.988e-14
Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 405
            +++ GG+E E  YPY   DG SC++      A+++ F  +  +ED +   +   GP++  I+A       Y  G+     C    + H +L+VGYG +G        + YW++KNS G  WG  GY KI   + N CG+
Sbjct:  190 VMENGGLESEATYPYEEKDG-SCRYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCVVTHSMLLVGYGFTGRES---DGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGI 324          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.988e-14
Identity = 44/148 (29.73%), Postives = 71/148 (47.97%), Query Frame = 1
Query:   16 GVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVI-----SSDEDQMAANLVKHGPVAEGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 414
            G+ ++   PYTG D G C   K+      +++S I     +++E  M   L+ +GP   G             ++  T +      +   +  +H VL+VGYG       +   +PYW +KNSWG  WGE GY++I  G + CGV+S+
Sbjct:  304 GLPQKIVIPYTGEDTGKCTVSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFEVYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVD-----KLSGEPYWKVKNSWGVEWGEQGYFRILRGTDECGVESL 446          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14
Identity = 40/128 (31.25%), Postives = 66/128 (51.56%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 378
            ++K GG++ E+DYPY   +G   ++ K+     + ++  +  + ++     V H PV+  + A     Q Y  G+     CG  +DHGV+I GYG+            YWI++NSWG N  ENGY ++
Sbjct:   93 VIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGK-CGTAVDHGVVIAGYGTE-------NGMDYWIVRNSWGANCRENGYLRV 212          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14
Identity = 49/142 (34.51%), Postives = 68/142 (47.89%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGV 405
            I + GG+  E +YPY   DG +C   K    A S+     +  +++      V + PV+  I+A     Q Y  GV     CG  LDHGV IVGYG++           YW +KNSWG  WGE GY ++  G      +CG+
Sbjct:  201 IKQRGGITTEANYPYEAYDG-TCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGS-CGTELDHGVAIVGYGTT------IDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGI 334          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVI-SSDEDQMAANLVKHGPVAEGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 420
            + K  G++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++  I+A     Q Y  GV     C    L+H VL VGYG         K   +WIIKNSWGENWG  GY  +   + N CG+ ++ S
Sbjct:  190 VQKNRGIDSEDAYPYVGQDE-SCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.508e-14
Identity = 46/140 (32.86%), Postives = 65/140 (46.43%), Query Frame = 1
Query:    4 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGV 405
            ++  G+  E  YPY   DG       +    S+     + ++ +      V + P++  I A     Q Y  GV     CG  LDHGV IVGYG++           YWI+KNSWGE WGE+GY ++  G    R  CG+
Sbjct:  205 IQKNGITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGR-CGTELDHGVAIVGYGATRDGT------KYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGI 337          
The following BLAST results are available for this feature:
BLAST of CX290979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CRUST_PANBO2.239e-1435.71Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATK_PIG2.924e-1435.17Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATC_MACFA2.924e-1431.76Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
CATC_HUMAN3.819e-1431.76Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATM_MOUSE4.988e-1431.65Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATC_SCHMA4.988e-1429.73Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
CYSPL_SOLLC6.515e-1431.25Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSEP_RICCO6.515e-1434.51Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CATK_CANFA6.515e-1434.48Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CYSP_HEMSP8.508e-1432.86Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]

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Properties
Property NameValue
Genbank descriptionC03002D12Rv OF1 Citrus clementina cDNA clone C03002D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290979 ID=CX290979; Name=CX290979; organism=Citrus clementina; type=EST; length=491bp
ATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTACCCTTACACTGG
GACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAATTGCTGCATCTG
TATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAAATGGCTGCAAAT
TTGGTGAAACATGGCCCTGTGGCAGAGGGTATCAATGCCGTTTGGATGCA
AACATATATTGGAGGAGTTTCATGCCCATACATTTGCGGGAAGTATTTGG
ATCATGGAGTGCTTATCGTGGGCTATGGATCTTCAGGTTTCGCCCCGATC
CGTTTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGAGAGAA
CTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGTCTGTG
GGGTCGACTCCATGGTCTCATCTGTAGCTGCTGGCCATACAACCTCAAGC
TAGACATTATGGAGGTTGTGCTAGGCAAGTGGAGCTTATAT
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