CX290979

Overview
NameCX290979
Unique NameCX290979
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.508e-14
Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 420
            I+  GG+  E+ YPY G DG  C    +    S+ ++  + S  +Q     V + PV+  ++A     Q Y  G+     C    +H + +VGYG+         +K +WI+KNSWG+NWGE+GY  I   RN+      CG+    S
Sbjct:   77 IVNNGGINSEETYPYRGQDG-ICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGS-CNISANHALTVVGYGTEN-------DKDFWIVKNSWGKNWGESGY--IRAERNIENPDGKCGITRFAS 213          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.111e-13
Identity = 50/148 (33.78%), Postives = 72/148 (48.65%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 420
            I + GG+  E +YPYT  +G   +   + +A S+     +  +++      V + PV+  I+A     Q Y  GV     C   L+HGV IVGYG++           YWI++NSWG  WGE GY  I M RN+      CG+  M S
Sbjct:  203 IKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGD-CNTDLNHGVAIVGYGTT------VDGTNYWIVRNSWGPEWGEQGY--IRMQRNISKKEGLCGIAMMAS 341          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.111e-13
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVI-SSDEDQMAANLVKHGPVAEGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 420
            + K  G++ E  YPY G +  SC ++ +  AA    +  I   +E  +   + + GPV+  I+A     Q Y  GV     C    L+H VL VGYG         K   +WIIKNSWGENWG  GY  +   + N CG+ ++ S
Sbjct:  189 VQKNRGIDSEDAYPYVGQEE-SCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-------KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.111e-13
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVI-SSDEDQMAANLVKHGPVAEGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 420
            + K  G++ E  YPY G +  SC ++ +  AA    +  I   +E  +   + + GPV+  I+A     Q Y  GV     C    L+H VL VGYG         K   +WIIKNSWGENWG  GY  +   + N CG+ ++ S
Sbjct:  189 VQKNRGIDSEDAYPYVGQEE-SCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-------KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.111e-13
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVI-SSDEDQMAANLVKHGPVAEGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 420
            + K  G++ E  YPY G +  SC ++ +  AA    +  I   +E  +   + + GPV+  I+A     Q Y  GV     C    L+H VL VGYG         K   +WIIKNSWGENWG  GY  +   + N CG+ ++ S
Sbjct:  189 VQKNRGIDSEDAYPYVGQEE-SCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-------KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.451e-13
Identity = 46/148 (31.08%), Postives = 71/148 (47.97%), Query Frame = 1
Query:   16 GVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISS-----DEDQMAANLVKHGPVAEGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 414
            G+  E  +PYTGTD   CK  +       S +  +       +E  M   LV HGP+A               ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG  WGE+GY++I  G + C ++S+
Sbjct:  315 GLVEEACFPYTGTDS-PCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGTGWGEDGYFRIRRGTDECAIESI 453          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.895e-13
Identity = 49/145 (33.79%), Postives = 71/145 (48.97%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVI-SSDEDQMAANLVKHGPVAEGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 420
            + K  G++ E  YPY G D  +C ++ +  AA    +  I   +E  +   + + GP++  I+A     Q Y  GV     C    L+H VL VGYG         K   +WIIKNSWGENWG  GY  +   + N CG+ ++ S
Sbjct:  189 VQKNRGIDSEDAYPYVGQDE-NCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.476e-13
Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 1
Query:   19 VEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVIS-SDEDQMAANLVKHGPVAEGINAVWMQT---YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM-GRNVCGVDSMVS 420
            ++ E  YPY   D   C +D    AA+ S +  +   DE+ +   +   GPV+ GI+     +   Y  GV     C + ++HGVL+VGYG+          K YW++KNSWG ++G+ GY ++    +N CG+ S  S
Sbjct:  196 IDSEASYPYKAMDE-KCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGT-------LDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCS 326          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.233e-13
Identity = 46/148 (31.08%), Postives = 71/148 (47.97%), Query Frame = 1
Query:   16 GVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISS-----DEDQMAANLVKHGPVAEGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 414
            G+  E  +PYTGTD   C+  +       S +  +       +E  M   LV  GP+A               V+  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG +WGENGY++I  G + C ++S+
Sbjct:  315 GLVEEDCFPYTGTDS-PCRLKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHQGPMAVAFEVYDDFLHYRKGVYHHT---GLRDPFNPFELTNHAVLLVGYGTDAASGL-----DYWIVKNSWGTSWGENGYFRIRRGTDECAIESI 453          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.223e-13
Identity = 52/157 (33.12%), Postives = 81/157 (51.59%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNF-SVISSDE------DQMAANLVKHGPVAEGINAVWMQTYIGGV----SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 420
            +L+ GG+  + DYPY   +G  CK +K +   ++  + ++I SDE      +Q   + +   P++  I+A     Y GG+    +C    G  ++H VL+VGYGS+           YWI KNSWG +WGE+GY  I + RN      VCG++   S
Sbjct:  209 VLEHGGIATDDDYPYRAKEG-RCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAKDFHLYTGGIYDGENCTSPYG--INHFVLLVGYGSADGVD-------YWIAKNSWGFDWGEDGY--IWIQRNTGNLLGVCGMNYFAS 353          
The following BLAST results are available for this feature:
BLAST of CX290979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CPGP2_ZINOF8.508e-1431.76Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSEP_VIGMU1.111e-1333.78Vignain OS=Vigna mungo PE=1 SV=1[more]
CATK_MACMU1.111e-1334.48Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.111e-1334.48Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN1.111e-1334.48Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATC_PONAB1.451e-1331.08Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATK_BOVIN1.895e-1333.79Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATS_RAT2.476e-1332.37Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATC_BOVIN3.233e-1331.08Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
P34_SOYBN4.223e-1333.12P34 probable thiol protease OS=Glycine max PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC03002D12Rv OF1 Citrus clementina cDNA clone C03002D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290979 ID=CX290979; Name=CX290979; organism=Citrus clementina; type=EST; length=491bp
ATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTACCCTTACACTGG
GACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAATTGCTGCATCTG
TATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAAATGGCTGCAAAT
TTGGTGAAACATGGCCCTGTGGCAGAGGGTATCAATGCCGTTTGGATGCA
AACATATATTGGAGGAGTTTCATGCCCATACATTTGCGGGAAGTATTTGG
ATCATGGAGTGCTTATCGTGGGCTATGGATCTTCAGGTTTCGCCCCGATC
CGTTTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGAGAGAA
CTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGTCTGTG
GGGTCGACTCCATGGTCTCATCTGTAGCTGCTGGCCATACAACCTCAAGC
TAGACATTATGGAGGTTGTGCTAGGCAAGTGGAGCTTATAT
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