CX290979

Overview
NameCX290979
Unique NameCX290979
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSM 414
            +L  GG+E E  YPY   +G  C+++    +A ++ F V+   ED +   +   GP+A G++ +    + Y  GV     C  Y++H VL+VGYG  G          YW+IKNSWG+ WG  GY KI   R N C + S+
Sbjct:  201 VLHNGGLEAEATYPYERKEG-VCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGNET---DGNNYWLIKNSWGKRWGLRGYMKIAKDRNNHCAIASL 337          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 420
            +LK  G+E E  YPY G DG  C++     +A+++++  +  +E  +   +   GPV+  I+A     + Y GG+     C  Y ++H VL+VGYGS G          YW+IKNSWGE WG NGY +I     N CG+ S+ S
Sbjct:  190 VLKNKGLEAEATYPYEGKDG-PCRYRSENASANITDYVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVLVVGYGSEGDVK---DGNNYWLIKNSWGEEWGMNGYMQIAKDHNNHCGIASLAS 329          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.957e-18
Identity = 51/150 (34.00%), Postives = 75/150 (50.00%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTG-TDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVWMQTYIGGV--SCPYICGKYL-DHGVLIVGYGSS-----------GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 405
            +L   G+  EKDYP+ G      C   K    A + +F ++  +E ++A  L   GP+   IN   ++ Y  GV  + P  C  +L DH VL+VG+G S           G  P   +  P+WI+KNSWG  WG  GY+++  G N CG+
Sbjct:  203 VLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTINMKLLKLYKKGVIEATPTSCDPFLVDHSVLLVGFGKSESVADRRAGAAGAQPQSRRSIPFWILKNSWGTKWGXGGYFRLYRGNNTCGI 352          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.957e-18
Identity = 55/144 (38.19%), Postives = 76/144 (52.78%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 420
            +LK  G+E E  YPY G DG  C++     +A+++ F  +  +E  +   +   GPV+  I+A     + Y GGV     C  Y+ +H VL+VGYG  G          YW+IKNSWGE WG NG+ KI   R N CG+ S  S
Sbjct:  190 VLKNKGLEAEATYPYEGKDG-PCRYHSENASANITGFVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSYVVNHAVLVVGYGFEGNET---DGNNYWLIKNSWGEEWGINGFMKIAKDRNNHCGIASQAS 329          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.957e-18
Identity = 54/143 (37.76%), Postives = 77/143 (53.85%), Query Frame = 1
Query:   13 GGVEREKDYPYTGTDGGSCKFDKSKIAASVSN---FSVISSDEDQMAANLVKHGPVAEGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 420
            GG++ EK YPYTG D  +CKF    +   V N    ++ + DE + A  LV+  PV+     +   + Y  GV     CG     ++H VL VGYG     P       YW+IKNSWG +WG+ GY+K+ MG+N+CG+ +  S
Sbjct:  221 GGLDTEKAYPYTGKDE-TCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVP-------YWLIKNSWGADWGDKGYFKMEMGKNMCGIATCAS 353          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 54/147 (36.73%), Postives = 74/147 (50.34%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV----CGVDSMVS 420
            I+K GG++ E DYPY   DG  C  ++      S+  F  +  ++++     V H PV+  I A     Q Y  GV     CG  LDHGV+ VGYG+          K YWI++NSWG  WGE+GY ++    NV    CG+  M S
Sbjct:  217 IIKNGGIDTEDDYPYKAVDG-KCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTSLDHGVVAVGYGTDN-------GKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMAS 354          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 56/148 (37.84%), Postives = 75/148 (50.68%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 420
            I + GG++ E+DYPYT  DG      +S+   S+  F  +  +++      V H PV+  I+A     Q Y  GV     CG  LDHGV+ VGYG+            YW ++NSWG +WGENGY  I M RNV      CG+  M S
Sbjct:  232 IARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGR-CGTNLDHGVVAVGYGTDAAT-----GAAYWTVRNSWGPDWGENGY--IRMERNVTARTGKCGIAMMAS 371          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 56/143 (39.16%), Postives = 79/143 (55.24%), Query Frame = 1
Query:   13 GGVEREKDYPYTGTDGGSCKFDKSKIAASVS---NFSVISSDEDQMAANLVKHGPVAEGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 420
            GG++ E+ YPYTG +G  CKF ++ I   V    N ++ +  E + A  LV+  PV+     V   + Y  GV     CG     ++H VL VGYG     P       YW+IKNSWG +WGE+GY+K+ MG+N+CGV +  S
Sbjct:  219 GGLDTEEAYPYTGKNG-ICKFSQANIGVKVISSVNITLGAEYELKYAVALVR--PVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTP-------YWLIKNSWGADWGEDGYFKMEMGKNMCGVATCAS 351          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.360e-18
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFS-VISSDEDQMAANLVKHGPVAEGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 429
            I+  GGV+ E DYPY  ++   C+ D +K    V   +  I+  E+++   L   GP+   I+A  +  Y  G+   Y     L+H VL+VGYG            PYWI+KNSWG +WGE G++KI    N CG+ + ++S A
Sbjct:  186 IISMGGVQIENDYPYESSNN-YCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGI-IKYCANNGLNHAVLLVGYGVEN-------NVPYWILKNSWGTDWGEQGFFKIQQNVNACGIKNELASTA 320          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.694e-18
Identity = 57/141 (40.43%), Postives = 74/141 (52.48%), Query Frame = 1
Query:   16 GVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVIS-SDEDQMAANLVKHGPV--AEGINAVWMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 420
            G+  E  YPY G DG  CK+  SK  A V + + I+ +DE+ M   +  H PV  A  + A +M  Y  G+     C K  D   H VL VGYG         K  PYWI+KNSWG NWG  GY+ I  G+N+CG+ +  S
Sbjct:  198 GIMGEDTYPYRGQDG-DCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMM-YRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-------KGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACAS 329          
The following BLAST results are available for this feature:
BLAST of CX290979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CATQ_RAT1.498e-1835.46Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATJ_MOUSE1.498e-1836.81Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATW_FELCA1.957e-1834.00Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATJ_RAT1.957e-1838.19Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
ALEU_ARATH1.957e-1837.76Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
ORYB_ORYSJ2.556e-1836.73Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP1_ORYSJ2.556e-1837.84Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSP3_SOLLC3.338e-1839.16Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATV_NPVEP4.360e-1835.42Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATH_BOVIN5.694e-1840.43Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC03002D12Rv OF1 Citrus clementina cDNA clone C03002D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290979 ID=CX290979; Name=CX290979; organism=Citrus clementina; type=EST; length=491bp
ATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTACCCTTACACTGG
GACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAATTGCTGCATCTG
TATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAAATGGCTGCAAAT
TTGGTGAAACATGGCCCTGTGGCAGAGGGTATCAATGCCGTTTGGATGCA
AACATATATTGGAGGAGTTTCATGCCCATACATTTGCGGGAAGTATTTGG
ATCATGGAGTGCTTATCGTGGGCTATGGATCTTCAGGTTTCGCCCCGATC
CGTTTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGAGAGAA
CTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGTCTGTG
GGGTCGACTCCATGGTCTCATCTGTAGCTGCTGGCCATACAACCTCAAGC
TAGACATTATGGAGGTTGTGCTAGGCAAGTGGAGCTTATAT
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