CX290979

Overview
NameCX290979
Unique NameCX290979
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.657e-17
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 1
Query:   13 GGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 390
            GG++ E+ YPY    G SCK+      A+V+++  I S E+++   L   GP++  I+A     + Y  G+     C    +DHGVL+VGYG+ G      + K YWIIKNSWG +WG +GY K+   R
Sbjct:   15 GGLDSEESYPYHA-QGDSCKYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADG---TETENKKYWIIKNSWGTDWGMDGYIKMAKDR 139          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.164e-17
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSN-FSVISSDEDQMAANLVKHGPVAEGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 429
            I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+   I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+G++++    N CG+ + ++S A
Sbjct:  186 IIKMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTA 320          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.826e-17
Identity = 49/147 (33.33%), Postives = 80/147 (54.42%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSK--IAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 429
            I++ GGV+ E DYP+ G +   C  D+ +  + + V  +  +  +E+++   L   GP+   I+A  +  Y  GV  SC       L+H VL+VGYG     P       YW+ KN+WG++WGENGY+++    N CG+ + ++S A
Sbjct:  218 IMRMGGVQTELDYPFVGRNR-RCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGVP-------YWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTA 353          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.691e-17
Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSN-FSVISSDEDQMAANLVKHGPVAEGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 429
            I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+   I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE G++++    N CG+ + ++S A
Sbjct:  186 IIKMGGVQLESDYPYEA-DNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEEGFFRVQQNINACGMRNELASTA 320          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.691e-17
Identity = 49/135 (36.30%), Postives = 71/135 (52.59%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 405
            I++AGG+  E  YPYTG DG  CK     +  S   ++     E ++   L + GPV+  I+ V +  Y  GV+        L+HGVL+VGYG          +  YW +KNSWG +WGE G+++I    N CG+
Sbjct:  207 IIRAGGISYEAPYPYTGVDG-VCKNTTRYVQLS-GCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKHCSVDHGLNHGVLLVGYGQEN-------DVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.691e-17
Identity = 53/141 (37.59%), Postives = 71/141 (50.35%), Query Frame = 1
Query:   13 GGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKH-GPVAEGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 420
            GG++ E+ YPYT  D   C++     AA+ + F  I    ++     V   GPV+  I+A     Q Y  G+     C    LDHGVL+VGYG  G        K YWI+KNSWGE WG+ GY  +   R N CG+ +  S
Sbjct:   81 GGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEG-------GKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 214          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.820e-17
Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSN-FSVISSDEDQMAANLVKHGPVAEGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 429
            I+K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+   I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+G++++    N CG+ + ++S A
Sbjct:  186 IIKMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTA 320          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.820e-17
Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 1
Query:   13 GGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 420
            GG++ E+ YPY G +  SC +     AA+ + F  I   E  +   +   GP++  I+A     Q Y  G+     C  K LDHGVL+VGYG  G      K   +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  194 GGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSK---FWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAAS 330          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.295e-17
Identity = 52/143 (36.36%), Postives = 74/143 (51.75%), Query Frame = 1
Query:   13 GGVEREKDYPYTGTDGGSCKFDKSKIAASVS---NFSVISSDEDQMAANLVKHGPVAEGINAV-WMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 420
            GG++ E+ YPY G +G  C +     A  V    N ++ + DE + A  LV+  PV+     +   + Y  GV     CG   D   H VL VGYG     P       YW+IKNSWG +WG+NGY+K+ MG+N+C + +  S
Sbjct:  224 GGIDTEESYPYKGVNG-VCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVR--PVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVP-------YWLIKNSWGADWGDNGYFKMEMGKNMCAIATCAS 356          
BLAST of CX290979 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 8.222e-17
Identity = 50/143 (34.97%), Postives = 80/143 (55.94%), Query Frame = 1
Query:    1 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAASVSNFSVISSDEDQMAANLVKHGPVAEGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 429
            IL+ GGV   ++ PY G DG  CK    +++ S S   V+ + E+++   LV +GP++  I+   +  Y  G++      + L+H VL+VGYG          + PYWI+KNSWG  WGE GY+++   +N CG+ +  +S A
Sbjct:  198 ILQEGGVVSAENEPYYGFDG-VCKKSPFELSISGSRRYVLQN-ENKLRELLVVNGPISVAIDVSDLINYKAGIADICENNEGLNHAVLLVGYGVKN-------DVPYWILKNSWGAEWGEEGYFRVQRDKNSCGMMNEYASSA 331          
The following BLAST results are available for this feature:
BLAST of CX290979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CATL1_FELCA1.657e-1737.98Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
CATV_NPVAC2.164e-1733.33Viral cathepsin OS=Autographa californica nuclear ... [more]
CATV_NPVLD2.826e-1733.33Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVRO3.691e-1733.33Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_GVXN3.691e-1736.30Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATL1_CHICK3.691e-1737.59Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CATV_NPVBM4.820e-1733.33Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATL1_PIG4.820e-1737.14Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
ALEU_HORVU6.295e-1736.36Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATV_GVCP8.222e-1734.97Viral cathepsin OS=Cydia pomonella granulosis viru... [more]

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Properties
Property NameValue
Genbank descriptionC03002D12Rv OF1 Citrus clementina cDNA clone C03002D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290979 ID=CX290979; Name=CX290979; organism=Citrus clementina; type=EST; length=491bp
ATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTACCCTTACACTGG
GACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAATTGCTGCATCTG
TATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAAATGGCTGCAAAT
TTGGTGAAACATGGCCCTGTGGCAGAGGGTATCAATGCCGTTTGGATGCA
AACATATATTGGAGGAGTTTCATGCCCATACATTTGCGGGAAGTATTTGG
ATCATGGAGTGCTTATCGTGGGCTATGGATCTTCAGGTTTCGCCCCGATC
CGTTTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGAGAGAA
CTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGTCTGTG
GGGTCGACTCCATGGTCTCATCTGTAGCTGCTGGCCATACAACCTCAAGC
TAGACATTATGGAGGTTGTGCTAGGCAAGTGGAGCTTATAT
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