CX291018

Overview
NameCX291018
Unique NameCX291018
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_SULNB (Sulfate adenylyltransferase subunit 1 OS=Sulfurovum sp. (strain NBC37-1) GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 2 
Query:   20 DKRVIERFEKEAAEMNKRSF-------KYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427
            D ++I   +  AAE   R +         A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM+TG S AD A+++ID+  G          QTR H+ +   LG++ +I   NKMD     +S+  +D+I
Sbjct:   47 DSKMIFDDQLSAAEGESRKYGTTGEKLDMALLVDGLQSEREQGITIDVAYRFFATEKRKFIIADTPGHEQYTRNMVTGASTADVAIILIDARKGILT-------QTRRHSFIVNLLGIEHVIVAINKMDLV--DFSEEVFDKI 180
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_SHISS (Sulfate adenylyltransferase subunit 1 OS=Shigella sonnei (strain Ss046) GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2 
Query:   86 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRI 183
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_SHIFL (Sulfate adenylyltransferase subunit 1 OS=Shigella flexneri GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2 
Query:   86 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRI 183
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_SHIF8 (Sulfate adenylyltransferase subunit 1 OS=Shigella flexneri serotype 5b (strain 8401) GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2 
Query:   86 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRI 183
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_SHIBS (Sulfate adenylyltransferase subunit 1 OS=Shigella boydii serotype 4 (strain Sb227) GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2 
Query:   86 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTHI 183
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_SHIB3 (Sulfate adenylyltransferase subunit 1 OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2 
Query:   86 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRI 183
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_SALTY (Sulfate adenylyltransferase subunit 1 OS=Salmonella typhimurium GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:   86 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 385
            A ++D L+AERE+GITID+A   F T +    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_PHOPR (Sulfate adenylyltransferase subunit 1 OS=Photobacterium profundum GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 2 
Query:   86 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 385
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G  +       QTR H+ +A  LG++  I   NKMD
Sbjct:   78 ALLVDGLQAEREQGITIDVAYRYFSTKKRKFIIADTPGHEQYTRNMATGASTCDVAVILIDARKGVLD-------QTRRHSYIASLLGIRHFIVAINKMD 170
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_METC4 (Sulfate adenylyltransferase subunit 1 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 2 
Query:   83 YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIV 430
            +A ++D L+AERE+GITID+A   F T +    V D PGH  + +NM TG S AD AV+++D+  G          Q+R HALL   LG++++    NKMD     +S+ +++ IV
Sbjct:   75 FALLVDGLQAEREQGITIDVAYRFFSTDRRSFIVADTPGHEQYTRNMATGASTADLAVILVDARHG-------LTRQSRRHALLVSLLGIRRVALAINKMDLV--GWSQDKFEAIV 181
[Close]
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: CYSN_ENTS8 (Sulfate adenylyltransferase subunit 1 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=cysN PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:   86 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 385
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L++D+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLMDARKGVLD-------QTRRHSFISTLLGIKHLVVAVNKMD 171
The following BLAST results are available for this feature:
BLAST of CX291018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_SULNB8.522e-1634.97Sulfate adenylyltransferase subunit 1 OS=Sulfurovu... [more]
CYSN_SHISS8.522e-1638.60Sulfate adenylyltransferase subunit 1 OS=Shigella ... [more]
CYSN_SHIFL8.522e-1638.60Sulfate adenylyltransferase subunit 1 OS=Shigella ... [more]
CYSN_SHIF88.522e-1638.60Sulfate adenylyltransferase subunit 1 OS=Shigella ... [more]
CYSN_SHIBS8.522e-1638.60Sulfate adenylyltransferase subunit 1 OS=Shigella ... [more]
CYSN_SHIB38.522e-1638.60Sulfate adenylyltransferase subunit 1 OS=Shigella ... [more]
CYSN_SALTY8.522e-1641.00Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_PHOPR8.522e-1643.00Sulfate adenylyltransferase subunit 1 OS=Photobact... [more]
CYSN_METC48.522e-1639.66Sulfate adenylyltransferase subunit 1 OS=Methyloba... [more]
CYSN_ENTS88.522e-1641.00Sulfate adenylyltransferase subunit 1 OS=Enterobac... [more]

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Properties
Property NameValue
Genbank descriptionC03003A04SK OF2 Citrus clementina cDNA clone C03003A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291018 ID=CX291018; Name=CX291018; organism=Citrus clementina; type=EST; length=433bp
CTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGG
AAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGGTGCTCGAC
AAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTG
GAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCCGGAC
ATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGT
GCCGTCCTCATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTC
CAAGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTG
TGAAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAG
TATTCAAAGGCTAGGTACGATGAAATTGTGAAG
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