CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_ACIB5 (Glycine cleavage system H protein OS=Acinetobacter baumannii (strain AB0057) GN=gcvH PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.924e-31 Identity = 62/115 (53.91%), Postives = 80/115 (69.57%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 +LKYA +HEWVK++G+ GITDHAQD LGD+VYVE PEVG V G G VESVK SD+++PVSG VVEVN +L P VN PY GWI K++ D+ +++KL+ +Y Sbjct: 6 ELKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTASDIHAPVSGTVVEVNTDLEDDPDFVNEDPYGKGWIYKIKPDNIADVEKLLTNAEY 120
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_ACIB3 (Glycine cleavage system H protein OS=Acinetobacter baumannii (strain AB307-0294) GN=gcvH PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.924e-31 Identity = 62/115 (53.91%), Postives = 80/115 (69.57%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 +LKYA +HEWVK++G+ GITDHAQD LGD+VYVE PEVG V G G VESVK SD+++PVSG VVEVN +L P VN PY GWI K++ D+ +++KL+ +Y Sbjct: 6 ELKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTASDIHAPVSGTVVEVNTDLEDDPDFVNEDPYGKGWIYKIKPDNIADVEKLLTNAEY 120
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_VIBFM (Glycine cleavage system H protein OS=Vibrio fischeri (strain MJ11) GN=gcvH PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.819e-31 Identity = 63/124 (50.81%), Postives = 88/124 (70.97%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 KDLK+ SHEWV+ +G+ + T+GI+DHAQ LGDVV+V+LP+V V G F VESVKA SD+ SPV+G +VE+NEEL SP VN PY+ GWI ++++ + EL+ L+ +D Y + +EE Sbjct: 3 KDLKFTASHEWVRDNGDGTVTVGISDHAQGLLGDVVFVDLPDVDDEVTAGEGFSLVESVKAASDIYSPVTGVIVEINEELEDSPEQVNEEPYESGWIARIKLSDSSELESLIPSDTYLESLDEE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PHOLL (Glycine cleavage system H protein OS=Photorhabdus luminescens subsp. laumondii GN=gcvH PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.819e-31 Identity = 59/124 (47.58%), Postives = 88/124 (70.97%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 +LKY +SHEWV+ +GN T+GIT+HAQ+ LGD+V+V+LPEVG + G VESVKA SD+ +P+SGK++ VN+ L+ +P LVNS PY +GW+ +++ EL L++A+ Y +EE+ Sbjct: 7 ELKYVESHEWVRAEGNDEYTVGITEHAQELLGDMVFVDLPEVGDQINLGDDCAVVESVKAASDIYAPLSGKIIAVNDALNDAPELVNSEPYHEGWLFRIKASDKSELSSLLNAEGYQALLDEEE 130
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PECCP (Glycine cleavage system H protein OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvH PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.819e-31 Identity = 60/124 (48.39%), Postives = 88/124 (70.97%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 +LKY SHEWV +G ++GIT+HAQ+ LGD+V+++LPEVG V G ESVKA SD+ +P+SG++VEVN++L SSP LVNS+PY DGW+ ++ + +L +L+DA+ Y EE++ Sbjct: 7 ELKYTTSHEWVLHEGGGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAVAESVKAASDIYAPISGEIVEVNDDLESSPELVNSAPYADGWLFRIRISDESDLDELLDAEGYQASLEEDE 130
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_SHEAM (Glycine cleavage system H protein OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.988e-31 Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 9 DLKYADSHEWV-KVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 +LKYA SHEW+ K D + T+GIT+HAQ+ LGD+V+VELPEVG TV G ESVKA SD+ +P+SG+V+ VNE L SP LVNS Y DGW +++ EL L+DA+ Y +EE Sbjct: 7 ELKYASSHEWIRKEDDGTYTVGITEHAQELLGDMVFVELPEVGDTVSAGEDCAVAESVKAASDIYAPISGEVIAVNESLEDSPELVNSDAYGDGWFFRIKPSDESELDSLLDAEGYQAVIDEE 129
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_THEP3 (Glycine cleavage system H protein OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.514e-31 Identity = 65/124 (52.42%), Postives = 85/124 (68.55%), Query Frame = 3 Query: 3 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 I+ L Y+ HEWVKV+G+ A IGITD+AQ LG++VY+ELPEVG + G G VESVKA SDV +PV GKV+EVN + P+LVN+ PY W+ VE+ +L LM A++Y KF +EE Sbjct: 4 IEGLYYSKDHEWVKVEGDKAYIGITDYAQHSLGNIVYIELPEVGAELSAGDVLGVVESVKAASDVYTPVDGKVLEVNNAIVDDPSLVNNDPY-GSWMALVELKDKSQLDNLMTAEEYKKFLDEE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_TERTT (Glycine cleavage system H protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.514e-31 Identity = 65/123 (52.85%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 +LKY SHEW +V+ + + TIGITDHAQ+ LGDVV+VE PEVG V G G VESVKA SD+ SPV+G+V+ VNE L +P VN SPY +GW KV+ EL MD++ Y K E++ Sbjct: 7 ELKYLSSHEWARVEEDGTVTIGITDHAQEALGDVVFVETPEVGSQVSAGEEAGVVESVKAASDIYSPVTGEVIAVNELLEEAPETVNESPYDEGWFFKVKPSDVSELDGAMDSEAYVKSVEDD 129
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CYTH3 (Glycine cleavage system H protein OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.507e-31 Identity = 61/116 (52.59%), Postives = 84/116 (72.41%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYT 356 +LKY+ HEWV+V+G +A +GITD AQ LGD+VY+++ VG T+ + A FG +E+VK SD+ PVSG+V+E N EL S+P LVNS PY GWI+KV + +A +L L+DA YT Sbjct: 6 ELKYSKDHEWVRVEGQTAYVGITDFAQKELGDIVYLDVTSVGQTIDKEAIFGTIEAVKTVSDLFMPVSGEVLEFNAELESAPELVNSDPYGKGWIVKVTLANASDLDALLDAAAYT 121
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CHRSD (Glycine cleavage system H protein OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.507e-31 Identity = 63/124 (50.81%), Postives = 86/124 (69.35%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 +L+Y DSHEWV +G+ + TIGITDHAQ+ LGDVV+VELPE G + G FG +ESVKA SD+ P+SG+++ VNE L +P VN +PY+DGWIIK+++ L+ L+DA Y E+ Sbjct: 7 NLRYTDSHEWVLDNGDGTVTIGITDHAQEALGDVVFVELPETGRELDAGEEFGVIESVKAASDLYLPLSGEIIAVNESLEDAPETVNDNPYEDGWIIKLKLAEPEALESLLDATAYDALVSAEE 130 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |