CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CLOK5 (Glycine cleavage system H protein OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.406e-25 Identity = 56/123 (45.53%), Postives = 80/123 (65.04%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 K+L Y +SHEWVK++G+ A +G+TD+AQ LGD+V+V LPE G V G F VESVKA SDV +P+ G + EVNEEL P +N +PY + W++K+ + +KL+ A++Y E Sbjct: 5 KELMYTESHEWVKIEGDKALVGLTDYAQSELGDLVFVNLPEEGDEVTAGEVFLDVESVKAASDVYAPLGGVIEEVNEELLDRPGWINEAPY-EAWLVKI--GEISDREKLLTAEEYEAVVNSE 124
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CLOK1 (Glycine cleavage system H protein OS=Clostridium kluyveri (strain NBRC 12016) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.406e-25 Identity = 56/123 (45.53%), Postives = 80/123 (65.04%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 K+L Y +SHEWVK++G+ A +G+TD+AQ LGD+V+V LPE G V G F VESVKA SDV +P+ G + EVNEEL P +N +PY + W++K+ + +KL+ A++Y E Sbjct: 5 KELMYTESHEWVKIEGDKALVGLTDYAQSELGDLVFVNLPEEGDEVTAGEVFLDVESVKAASDVYAPLGGVIEEVNEELLDRPGWINEAPY-EAWLVKI--GEISDREKLLTAEEYEAVVNSE 124
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_RHILW (Glycine cleavage system H protein OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.836e-25 Identity = 51/114 (44.74%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 LK+ + HEW++++G+ AT+GIT++A D LGD+V+VELPEVG T + + VESVKA SDV P+ G++ EVN + + P+LVNS P GW K+++ + + L+D Y Sbjct: 2 LKFTEEHEWLQIEGSVATVGITNYAVDQLGDLVFVELPEVGATFSKNGNAATVESVKAASDVYCPLDGEITEVNPAIVADPSLVNSDPQGAGWFFKLKLANPADADGLLDEAAY 115
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_NITEC (Glycine cleavage system H protein OS=Nitrosomonas eutropha (strain C91) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.836e-25 Identity = 55/123 (44.72%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 +LKYA SHEW+K++ + + T+GIT HAQ+ LGD+V+VELP+VG + Q VESVKA SD+ +P+SG+V+ +N E+ SSP +N Y W+ K++ + E+ L+DA+ Y K E + Sbjct: 6 ELKYAKSHEWIKLEADGTVTVGITQHAQELLGDMVFVELPKVGRILAQQEDCAVVESVKAASDIYAPLSGEVIAINAEVESSPEKINEDSY-SAWLFKLKPANTAEIDGLLDANGYEKLLESD 127
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_BEII9 (Glycine cleavage system H protein OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.836e-25 Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 15 KYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKF 362 +Y HE+++V+G + T+GITD+AQ LGDVV+VELP +G + +G VESVKA S++ +PVSG+VV VNE L+ +P VN GW +++++ A EL LMD Y F Sbjct: 5 RYTKDHEYIRVEGETGTVGITDYAQSQLGDVVFVELPAIGKALTKGGEAAVVESVKAASEIYAPVSGEVVAVNEALAEAPGTVNEDAAGKGWFLQIKLADAKELDGLMDEAGYQDF 120
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_AGRRK (Glycine cleavage system H protein OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.836e-25 Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 LK+ + HEW+ ++G+ AT+GIT HA LGD+V+VELPEVG + +G VESVKA S+V P+ G++ E+NE +++ P LVNS P GW K+++ + + L+D Y Sbjct: 2 LKFTEEHEWLNIEGDVATVGITAHAAGQLGDLVFVELPEVGASFSKGDDAATVESVKAASEVYCPLDGEITEINEAITADPELVNSDPMGAGWFFKLKLKNVADADGLLDESGY 115
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH1_DICDI (Probable glycine cleavage system H protein 1, mitochondrial OS=Dictyostelium discoideum GN=gcvH1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.836e-25 Identity = 53/120 (44.17%), Postives = 77/120 (64.17%), Query Frame = 3 Query: 15 KYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +Y + HEWV G+ + +GITD AQ LGD+V+VE+P++G T+ QG VESVKA SD+ P+ G + VN+EL SSP LVN P DGWI++ + + + LM+ QY ++ +E Sbjct: 26 RYTNDHEWVTSLGSQNYRLGITDFAQKQLGDIVFVEIPQIGATLSQGQPITVVESVKAASDIYIPMDGSITTVNQELESSPELVNEEPMGDGWIVEYKSSKTDQFQSLMNKAQYDEYIKE 145
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_THIDA (Glycine cleavage system H protein OS=Thiobacillus denitrificans (strain ATCC 25259) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25 Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 DLKY SHEWV+ + + S T+GIT HAQD LGD+V++E P VG T+ +G VESVKA SDV +PV+G+V+ N E+ SSP VN Y W+ K++ + ++ L+DA Y K E E Sbjct: 6 DLKYTQSHEWVRAEADGSVTVGITHHAQDLLGDMVFIENPAVGRTLAKGEECAVVESVKAASDVYAPVAGEVIAANGEVESSPESVNQDAY-TAWLFKIKPANPADVDALLDAAAYQKVVESE 127
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PROMT (Glycine cleavage system H protein OS=Prochlorococcus marinus (strain NATL2A) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25 Identity = 50/115 (43.48%), Postives = 81/115 (70.43%), Query Frame = 3 Query: 15 KYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTK 359 ++ADSHE+ D + IGI++ A D LGD+V+V+LPE G + +G SFG+VESVKA D+ +PVSG++V N + +SP + + P+ +GW++ + D+ +LK+LMD++ Y+K Sbjct: 10 RFADSHEYAFADDSLVRIGISEFAVDQLGDIVFVDLPEEGTAIAKGESFGSVESVKAVEDMYAPVSGEIVHRNNSVLASPEELQNDPHGEGWLLIIRPDNPAQLKELMDSETYSK 124
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PELPB (Glycine cleavage system H protein OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25 Identity = 54/124 (43.55%), Postives = 84/124 (67.74%), Query Frame = 3 Query: 6 KDLKYADSHEWVKV--DGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +DL+Y HEW+K+ DG++A +GITD AQ LGD+V+VEL G +KQ FG VE+VK +D+ +PV+G+++E+N L S+ +VN PY DGW++K+++ S + L+DA+ Y + E Sbjct: 5 EDLRYTKDHEWIKLLEDGSTALVGITDFAQHELGDIVFVELKSAGTVLKQHEVFGTVEAVKTVADLFAPVAGELLELNALLDSA-EIVNQDPYNDGWLVKMKVASPEAVHALLDAEAYRQLTGE 127 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |