CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PROMM (Glycine cleavage system H protein OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvH PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.976e-25 Identity = 52/122 (42.62%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 15 KYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDS 380 ++AD+HE+ +DG IGI+ A D LGD+V+V+LPEVG + +G +FG+VESVKA D+++P+SG++V +NE + SSP + + P+ +GW++ V +L+ LMDA Y E S Sbjct: 10 RFADTHEYASLDGELVRIGISAFAVDQLGDIVFVDLPEVGDRLNRGTTFGSVESVKAVEDLHAPISGELVRINESVLSSPDELQNDPHGEGWLLVVRPADPAQLQDLMDAATYANKVAIESS 131
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_BARQU (Glycine cleavage system H protein OS=Bartonella quintana GN=gcvH PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.976e-25 Identity = 50/117 (42.74%), Postives = 79/117 (67.52%), Query Frame = 3 Query: 3 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 + + + HEW+ V+G T+GIT++AQ+ LGD+V+V+LP+ G + +G + VESVKA SDV +P+ G+VVE+NE L++SP LVN K+GW+ K+ + +L+ L+D Y Sbjct: 1 MSQIYFTQDHEWLSVEGQVVTVGITNYAQEQLGDLVFVDLPQSGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINEALANSPELVNQKAEKEGWLWKMTVQDETQLEGLLDEAAY 117
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PROM3 (Glycine cleavage system H protein OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvH PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.111e-25 Identity = 49/113 (43.36%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 15 KYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 ++AD+HE+ +DG+ +GI+ A D LGD+V+V+LPEVG + +G +FG+VESVKA D+++P+SG++V +NE + SSP + + P+ +GW++ V +L+ LMDA Y Sbjct: 10 RFADTHEYASLDGDLVRVGISAFAVDQLGDIVFVDLPEVGDLLNRGTTFGSVESVKAVEDLHAPISGELVRINESVLSSPDELQNDPHGEGWLLVVRPADPAQLQDLMDAATY 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_MYCLE (Glycine cleavage system H protein OS=Mycobacterium leprae GN=gcvH PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.111e-25 Identity = 57/120 (47.50%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDG-NSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKK----LMDADQY 353 DL Y HEW++ ++ +G+TD AQ LGDVV+V+LPEVG + G SFG VES K+ SD+ +PVSG V VN +L SP LVNS PY GW++ V + G L+ L+DA+ Y Sbjct: 7 DLHYTAEHEWIRRSREDTVRVGLTDFAQSTLGDVVFVQLPEVGAELAAGKSFGEVESTKSVSDLYAPVSGTVSAVNTDLEGSPQLVNSDPYGAGWLLDVHVSDVGALESAIATLLDAETY 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_MYCLB (Glycine cleavage system H protein OS=Mycobacterium leprae (strain Br4923) GN=gcvH PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.111e-25 Identity = 57/120 (47.50%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDG-NSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKK----LMDADQY 353 DL Y HEW++ ++ +G+TD AQ LGDVV+V+LPEVG + G SFG VES K+ SD+ +PVSG V VN +L SP LVNS PY GW++ V + G L+ L+DA+ Y Sbjct: 7 DLHYTAEHEWIRRSREDTVRVGLTDFAQSTLGDVVFVQLPEVGAELAAGKSFGEVESTKSVSDLYAPVSGTVSAVNTDLEGSPQLVNSDPYGAGWLLDVHVSDVGALESAIATLLDAETY 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_MICAN (Glycine cleavage system H protein OS=Microcystis aeruginosa (strain NIES-843) GN=gcvH PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.111e-25 Identity = 51/117 (43.59%), Postives = 82/117 (70.09%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAG-ELKKLMDADQY 353 +DL+Y ++HE+V+++G AT+GI+ A D LGD+V++ELPE+G +K G+SFG +ESVKA D+ PVSG VV+ N+ + SP L+ P+ +GW++KV +++ L + A +Y Sbjct: 7 EDLRYLETHEYVRLEGEIATLGISAFAVDQLGDIVFLELPELGEALKVGSSFGTIESVKAVEDLYPPVSGTVVDRNQAMIDSPELIADDPHGEGWLLKVRVENPDTALADTLSASEY 123
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_METS4 (Glycine cleavage system H protein OS=Methylobacterium sp. (strain 4-46) GN=gcvH PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.111e-25 Identity = 49/114 (42.98%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 L++ + HEW++++G+ AT+GIT HA + LGD+V+V+LP+VG T+ +GA+ VESVKA SDV +P+ G+V E N+ + ++P VN P GW+ ++ + L LMD Y Sbjct: 2 LRFTEDHEWLRLEGDVATVGITRHAAEQLGDLVFVDLPKVGTTLSKGAAAAVVESVKAASDVYAPLDGEVTEANDAVVAAPETVNQDPEGAGWLYRMRLADPSSLDALMDEAAY 115
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_AGRVS (Glycine cleavage system H protein OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=gcvH PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.111e-25 Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTK 359 LK+ HEW++++G+ AT+GIT HA + LGD+V+VELPEVG T + VESVKA SDV P+ G+V E+N+ + P+LVNS P GW K+++ + + + L++ Y + Sbjct: 2 LKFTSEHEWLQIEGDIATVGITAHAAEQLGDLVFVELPEVGATFAKDGQAATVESVKAASDVYCPLDGEVTEINQAIVDDPSLVNSDPRGAGWFFKLKLANPADAEGLLNEAAYNE 117
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PYRKO (Probable glycine cleavage system H protein OS=Pyrococcus kodakaraensis GN=gcvH PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.190e-24 Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 3 Query: 12 LKYADSHEWVKV-DGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVE-MDSAGELKKLMDADQYTKF 362 L Y HEW +V D + +GI+D+AQ LGD+ YVELPEVG V +G +ESVKA S+V +PVSG+V+EVNE L SP L+N PY + WI K++ + ELK+LMDA Y ++ Sbjct: 13 LYYTKDHEWAQVLDDGTVLVGISDYAQKELGDLAYVELPEVGKEVSKGDVLCEIESVKAVSEVYAPVSGEVIEVNEALEDSPELLNEDPY-ENWIAKLKPTNLEEELKELMDAQAYAEY 130
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CLAMS (Glycine cleavage system H protein OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=gcvH PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.190e-24 Identity = 53/120 (44.17%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 L+Y HEWV +DG+ AT+GIT +A D LGDVV+VELP VG + G+ G +ES K+ ++ +P+ G V EVN+++ +SP LVNS P+ GW++KV ++ L L+ D+Y E Sbjct: 7 LQYTAEHEWVLIDGDVATVGITSYAADKLGDVVFVELPAVGDELAGGSVVGEIESTKSVGELFAPIDGTVTEVNDDVVASPDLVNSDPFGAGWLVKVRFEA---LPTLLSHDEYVALVGE 123 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |