CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_AZOSE (Glycine cleavage system H protein OS=Azoarcus sp. (strain EbN1) GN=gcvH PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.905e-24 Identity = 52/116 (44.83%), Postives = 79/116 (68.10%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 +LKY SHEW++V+ + S TIG+TDHAQ+ LGDVV++ELPE G + G + +ESVKA SD+ +PV G+V+ N++ +P VN+ Y W+ K++ +AG++ L+DA Y Sbjct: 7 ELKYTKSHEWIRVEADGSLTIGVTDHAQEALGDVVFLELPEAGRQLAAGEACAVIESVKAASDIYAPVDGEVIASNQDAVDAPESVNADAYA-AWLFKLKPANAGDVAALLDAQGY 121
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_THEAC (Probable glycine cleavage system H protein OS=Thermoplasma acidophilum GN=gcvH PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.713e-24 Identity = 53/119 (44.54%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCE 368 L Y +HEW + DGN+ATIGITD+AQ + D+VYV+LP+VG K G +ESVK+ DV SP++G V VNEE++ P +N PY W++K+ ++S GE + A +Y K + Sbjct: 10 LNYTKTHEWYRKDGNTATIGITDYAQSQMTDIVYVDLPKVGDKKKAGDVLLTIESVKSAEDVYSPITGTVTAVNEEVAKHPESINKDPY-GSWLVKMAIESEGE---HLSASEYRKLIQ 124
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_AZOSB (Glycine cleavage system H protein OS=Azoarcus sp. (strain BH72) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.007e-23 Identity = 51/116 (43.97%), Postives = 78/116 (67.24%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 DLKY SHEW++++ + T+G+TDHAQ LGDVV++ELPE G V G + +ESVKA SD+ +PV+G+V+ N+ ++ +P VN+ Y W+ K++ +AG+ L+DA Y Sbjct: 7 DLKYTKSHEWIRLEADGTLTVGVTDHAQAALGDVVFLELPEAGRVVSAGEACAVIESVKAASDIYAPVAGEVIARNDSVTDAPESVNADAYA-AWLFKLKPANAGDTSALLDAAGY 121
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_THEEB (Glycine cleavage system H protein OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvH PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.316e-23 Identity = 45/103 (43.69%), Postives = 76/103 (73.79%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDS 314 +DL+Y DSHE+++++G++AT+GI+ A D LGD+V+VELP VG ++ G FG +ESVKA D+ +P+ G V+ VN+ + +P + + PY +GW++KV++ + Sbjct: 7 EDLQYLDSHEYLRLEGDTATLGISAFAVDQLGDIVFVELPAVGDALEPGERFGTIESVKAVEDLYAPLGGTVIAVNQAVIDNPEQIAADPYGEGWLVKVQVST 109
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_SYNS9 (Glycine cleavage system H protein OS=Synechococcus sp. (strain CC9902) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.316e-23 Identity = 48/114 (42.11%), Postives = 79/114 (69.30%), Query Frame = 3 Query: 15 KYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYT 356 ++ADSHE+ +DG +GI+ A D LGD+V+V+LP+VG ++ +G SFG+VESVKA D+ +P++G+VVE NE + +SP + + P+ GW++ V +L+ L+D+ Y+ Sbjct: 10 RFADSHEYAHLDGELIRVGISAFAVDQLGDIVFVDLPDVGASLDKGTSFGSVESVKAVEDMYAPIAGEVVERNEAVLASPEELQNDPHGAGWLLVVRPSDPAQLETLLDSATYS 123
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_MAGSA (Glycine cleavage system H protein OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.316e-23 Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 15 KYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKF 362 ++ HEW++VDG+ T+GI+D+AQ LGDVV+VE+PE G V +GA VESVKA S+V SPVSG V N+ + P LVN + W K+ + + GE+ LMD Y + Sbjct: 5 RFTKDHEWIEVDGDVGTVGISDYAQHALGDVVFVEVPEPGRVVAKGAEAAVVESVKAASEVYSPVSGTVTAGNQAIVDQPGLVNEAAEGAAWFFKLTLSNPGEVADLMDQAAYDAY 120
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CORA7 (Glycine cleavage system H protein OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.718e-23 Identity = 55/120 (45.83%), Postives = 77/120 (64.17%), Query Frame = 3 Query: 9 DLKYADSHEWVK-----VDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 D Y++ HEW+ V G++ IGIT A D LG+VV+ ELP VG TV+ G + G VES K+ SD+ SPV+G V VNE + A++N+ P+ +GW+ +VE+ AGE LM AD+Y Sbjct: 7 DFSYSEDHEWINATADSVVGSTVRIGITSVATDRLGEVVFAELPAVGDTVEHGETCGEVESTKSVSDLYSPVTGTVTAVNEGVHDDYAVINNDPFGEGWLFEVEVTEAGE---LMTADEY 123
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PROMP (Glycine cleavage system H protein OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=gcvH PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.828e-23 Identity = 48/114 (42.11%), Postives = 79/114 (69.30%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 L+YAD+HE+VK + IG+++ A D LGD+V+VEL E G +++G +FG +ESVKA +V P SG+V+ VNE + +P ++ + P DGW++ ++ +S L +LM++D+Y Sbjct: 9 LRYADTHEYVKEENGLFKIGVSEFAIDQLGDIVFVELVEKGTNLQKGETFGTIESVKAVEEVYLPFSGEVISVNEGVIDNPEILQNDPIGDGWLLIIKSESNVLLDELMNSDEY 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_DECAR (Glycine cleavage system H protein OS=Dechloromonas aromatica (strain RCB) GN=gcvH PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.828e-23 Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 +LKY SHEW+ ++ + S T+GITDHAQ+ LGD+V+VELPEVG VESVKA +DV +P++G V EVN+ + +P VN Y W+ K+ D+ +L K++DA Y Sbjct: 7 NLKYTASHEWMLLNADGSVTVGITDHAQEALGDLVFVELPEVGAHFDAEKEIAVVESVKAAADVYAPIAGTVTEVNQAAADAPESVNQDAYA-AWLFKMTPDNVADLDKMLDAAAY 121
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_SYNPW (Glycine cleavage system H protein OS=Synechococcus sp. (strain WH7803) GN=gcvH PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.529e-23 Identity = 47/113 (41.59%), Postives = 78/113 (69.03%), Query Frame = 3 Query: 15 KYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 +YADSHE+ D + IG++ +A D LGD+V+V+LPEVG + +G+SFG VESVKA ++ +P+SG V++ NE L ++P + + P+ +GW++ ++ ++ +LMDA Y Sbjct: 10 RYADSHEYAWQDAAAVRIGLSAYAVDQLGDIVFVDLPEVGAELNRGSSFGTVESVKAVEEMYAPLSGVVLQRNEALLANPEELQNDPHGEGWLLVIQPGDPSQMDQLMDAATY 122 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |