CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_ANAD2 (Glycine cleavage system H protein OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 64/124 (51.61%), Postives = 88/124 (70.97%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 +DL+Y HEW + G++ +GITD AQ LGDVVYVELP+VG VK+G SFG VES KA S++ +P+SGKV+EVN+ LS +P +N PY++GW+I +E +L+ LMDA Y F EE++ Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKAVSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKAFVEEQE 128
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STACT (Glycine cleavage system H protein OS=Staphylococcus carnosus (strain TM300) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.392e-33 Identity = 63/122 (51.64%), Postives = 90/122 (73.77%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 ++LKY+ HEWVKV+G++ TIGIT++AQ LGD+V+VELPE +++ SFG+VESVK S++ +PVSG VVE+NEEL SP VN SPY+ W++KV+++ +L L+ ADQY + E Sbjct: 5 EELKYSKEHEWVKVEGDTVTIGITEYAQGELGDIVFVELPETEDDIEESESFGSVESVKTVSELYAPVSGSVVEINEELEDSPEFVNESPYEKAWMVKVKLNDESQLDDLLSADQYKEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_MARAV (Glycine cleavage system H protein OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=gcvH PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.329e-33 Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 DLKY ++H+WV+VD + +AT+GITD AQ+ LGDVVY+ +PE+G TV G G ESVK+ SDV SPV+G+V+E+NE+L P +VN PY DGW+ KV++ GEL+ LMDA Y + E+ Sbjct: 7 DLKYIETHQWVRVDADGTATVGITDFAQEQLGDVVYIGVPEMGATVNGGEEAGVAESVKSASDVFSPVTGEVIEINEKLEDEPEIVNEDPYGDGWMFKVKLADEGELEGLMDAAAYAEHVAAEE 130
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PSEA6 (Glycine cleavage system H protein OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=gcvH PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.960e-33 Identity = 64/123 (52.03%), Postives = 89/123 (72.36%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 DL+YA +HEWV+ +G+ T+GI++HAQ+ LGD+V+VELP+VG TV G ESVKA SDV +P+ G++V VNE+L SP LVNS PY DGW+ +++ D A E++ L+DA+ Y EEE Sbjct: 7 DLRYATTHEWVRPEGDGTFTVGISEHAQELLGDMVFVELPDVGATVSAGDDIAVAESVKAASDVYAPIGGEIVGVNEDLEDSPELVNSDPYGDGWLFRIKADDADEVEGLLDAEGYENSIEEE 129
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STRMK (Glycine cleavage system H protein OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.089e-33 Identity = 67/124 (54.03%), Postives = 84/124 (67.74%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNS-ATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 DLK+ SHEW +V+GN T+GI+DHAQ LGD+VYVELPEVG K G VESVKA SDV SP+SGKVVEVN LS P +N Y +GW+ VE+ +A E+ +L+D D Y + E +D Sbjct: 7 DLKFLKSHEWARVEGNGRVTVGISDHAQGLLGDLVYVELPEVGADAKAGEQIAVVESVKAASDVYSPISGKVVEVNSALSDKPETINEDAYGEGWMFVVELTNAEEVNELLDPDAYAEALENDD 130
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_YERE8 (Glycine cleavage system H protein OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.187e-32 Identity = 64/122 (52.46%), Postives = 86/122 (70.49%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 DLKYA SHEWV+ DG+ ++GIT+HAQ+ LGD+V+V+LPEVG V G+ ESVKA SD+ +P+SG+++ VN EL SSP LVNS+PY DGW+ ++ EL L+DA+ Y EE Sbjct: 7 DLKYASSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSEVSAGSDCAVAESVKAASDIYAPISGEIIAVNAELESSPELVNSAPYTDGWLFSIKASDESELDSLLDAEAYLATIEE 128
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_SACD2 (Glycine cleavage system H protein OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.187e-32 Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 +LKY +SHEW +V+ + + TIGITDHAQ+ LGDVV+VE+PEVG V G G VESVKA SD+ SPVSG+V+ VNE L +P VNSSPY DGW KV+ D EL+K + + Y E +D Sbjct: 7 ELKYLESHEWARVEEDGTVTIGITDHAQEALGDVVFVEVPEVGSQVSIGEEAGVVESVKAASDIYSPVSGEVIAVNEALEDAPETVNSSPYDDGWFFKVKPDDLDELEKALSMEDYKAAIESDD 130
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_RUBXD (Glycine cleavage system H protein OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.187e-32 Identity = 64/124 (51.61%), Postives = 89/124 (71.77%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 +DL Y +HEW +++G++AT+GITDHAQ+ LGDVV+VELPEVG +V+ G FG +ESVKA SD+ SPVSG+V EVN L SP VN PY +GW+++V + E L+ ++Y + EEE+ Sbjct: 6 QDLVYTRTHEWARIEGDAATVGITDHAQEELGDVVFVELPEVGSSVQAGEPFGTIESVKAVSDLYSPVSGEVTEVNTSLEESPEKVNEDPYGEGWLLRVRL---SEEPDLLSPEEYARRLEEEE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PARL1 (Glycine cleavage system H protein OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.187e-32 Identity = 65/122 (53.28%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 3 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCE 368 + D+++ D HEWV+VDG+ ATIGITD+AQ+ LGDVV+VELPEVG + G VESVKA S+V SPVSG+V++VN ++ +PA VN + DGW IK+ + EL KLMD Y++F E Sbjct: 1 MSDIRFTDQHEWVRVDGDIATIGITDYAQEQLGDVVFVELPEVGKDIAAGDEAAVVESVKAASEVYSPVSGEVIDVNSDIEKTPAGVNENAMGDGWFIKLRLADPSELDKLMDEAAYSEFVE 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_ALTMD (Glycine cleavage system H protein OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=gcvH PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.187e-32 Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 DL+YA +HEWV+ +G+ T+GI++HAQ LGD+V+VELP+VG V G ESVKA SDV +P+SG+VVEVNE+L SP LVNS PY DGW+ K++ D A E++ L+DA+ Y +EE Sbjct: 7 DLRYAATHEWVRPEGDGVFTVGISEHAQGLLGDMVFVELPDVGDAVSTGDDICVAESVKAASDVYAPISGEVVEVNEDLEDSPELVNSDPYGDGWLFKIKADDAAEVEGLLDAEGYENSIDEE 129 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |