CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12075 contig Ccv1_Contig12075:55..660. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PELLD (Chaperone protein dnaJ OS=Pelodictyon luteolum (strain DSM 273) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-16
Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            ++RD YEVLGVSR+    EIK AYRK+ALKYHPDKN ++  A D FKE   +Y +LS+ DKRR+YD  G   V
Sbjct:    1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_DEIPR (Chaperone protein dnaJ OS=Deinococcus proteolyticus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-16
Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            +D YEVLGVSR+ +D +IKSAYRK+A +YHPDKNA D  AA+ FKE   +Y +LSDP KR+ YD  G
Sbjct:    4 KDYYEVLGVSRSASDSDIKSAYRKLAKQYHPDKNAGDESAAEKFKEIGEAYAVLSDPQKRQAYDQFG 70          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_METFK (Chaperone protein dnaJ OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.344e-16
Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV+R+ TD+EIK AYRK+A+KYHPD+N ++P A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVNRDATDEEIKKAYRKLAMKYHPDRNPDNPKAEEHFKEAKEAYEVLSDDQKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPE (Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.755e-16
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGVS++ TD +IKSA+RK A++YHPD+N  +P A + FKE   +Y +LSDPDKR  YD  G E V
Sbjct:    4 KRDYYEVLGVSKDATDDQIKSAFRKKAMQYHPDRN-KEPDAEEKFKEVNQAYEVLSDPDKRANYDRFGHEGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_SALRD (Chaperone protein dnaJ OS=Salinibacter ruber (strain DSM 13855) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.292e-16
Identity = 37/71 (52.11%), Postives = 53/71 (74.65%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            RD Y++LGV  + +D+EIK AYRK A++YHPD+N +DP A   FKE + +Y +LSDP+KR++YD  G + V
Sbjct:    3 RDYYDILGVDEDASDKEIKKAYRKKAMEYHPDRNPDDPEAEQKFKEASEAYEVLSDPEKRQRYDQFGHDGV 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.292e-16
Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            +RD YEVLGV RN ++ EIK AYRK+A+KYHPDKNA D  A D FKE + +Y+ILSD  +R  YD  G
Sbjct:    3 KRDYYEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKAAEDKFKEISEAYSILSDTQQRVIYDQYG 70          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_SACD2 (Chaperone protein dnaJ OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.993e-16
Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGVS++ + QE+K AYRK+A+KYHPD+N++DP + D FKE + +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVSKDVSPQELKKAYRKVAMKYHPDRNSDDPNSEDKFKEASEAYEVLSDAQKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PSYCK (Chaperone protein dnaJ OS=Psychrobacter cryohalolentis (strain K5) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.993e-16
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLG 552
            +RD YE+LGVS+   ++EIK AYRK+A+KYHPD+N+ DP A + FKE + +Y +LS  +KR  YD  G  A               G    +F  +F   G
Sbjct:    3 KRDFYEILGVSKTADNKEIKRAYRKLAMKYHPDRNSEDPDAEEKFKEASMAYEVLSSEEKRSAYDRMGHAAFENGMGGGGFGGGGGGNFQDIFGDIFGNFG 103          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PROA2 (Chaperone protein dnaJ OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.993e-16
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            ++RD YEVLGV R+ T  EIK AYRK+A+KYHPDKN ++  A + FKE   +Y +LS+ DKRR+YD  G   V
Sbjct:    1 MKRDYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGV 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBHA (Chaperone protein dnaJ OS=Vibrio harveyi GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.909e-16
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVSR+ ++++IK AY+++A+KYHPD+N  D  AAD FKE   SY IL+DP K+  YD  G  A
Sbjct:    3 KRDFYEVLGVSRDASERDIKKAYKRLAMKYHPDRNQGDESAADKFKEVKESYEILTDPQKKAAYDQYGHAA 73          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PELLD1.029e-1657.53Chaperone protein dnaJ OS=Pelodictyon luteolum (st... [more]
DNAJ_DEIPR1.029e-1661.19Chaperone protein dnaJ OS=Deinococcus proteolyticu... [more]
DNAJ_METFK1.344e-1655.56Chaperone protein dnaJ OS=Methylobacillus flagella... [more]
DNAJ_MYCPE1.755e-1656.94Chaperone protein dnaJ OS=Mycoplasma penetrans GN=... [more]
DNAJ_SALRD2.292e-1652.11Chaperone protein dnaJ OS=Salinibacter ruber (stra... [more]
DNAJ_PELCD2.292e-1660.29Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNAJ_SACD22.993e-1654.17Chaperone protein dnaJ OS=Saccharophagus degradans... [more]
DNAJ_PSYCK2.993e-1640.59Chaperone protein dnaJ OS=Psychrobacter cryohalole... [more]
DNAJ_PROA22.993e-1654.79Chaperone protein dnaJ OS=Prosthecochloris aestuar... [more]
DNAJ_VIBHA3.909e-1654.93Chaperone protein dnaJ OS=Vibrio harveyi GN=dnaJ P... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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