CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEF5 (Chaperone protein dnaJ OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV R  +D E+K AYR++A+K+HPD+N  D  + D+FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVERGSSDAELKKAYRRLAMKHHPDRNPGDKASEDMFKEANEAYEVLSDSSKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_NITEU (Chaperone protein dnaJ OS=Nitrosomonas europaea GN=dnaJ PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 1
Query:  256 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            D YEVLGV R+  + E+K AYRK+A+KYHPD+NA D  A + FK    +Y ILSDP+KR  YD  G
Sbjct:    5 DYYEVLGVGRDADENELKKAYRKLAMKYHPDRNAGDTKAEERFKNIKEAYEILSDPNKRAAYDQFG 70          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOAB (Chaperone protein dnaJ OS=Clostridium acetobutylicum GN=dnaJ PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            +D YEVLG+ +  +D EIK A+RK+A+KYHPDKN  +  A + FKE   +Y +LSDPDK+  YD  G
Sbjct:    4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNRGNKEAEEKFKEINEAYQVLSDPDKKANYDRFG 70          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRVO (Chaperone protein dnaJ OS=Chromobacterium violaceum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD Y+VLGV+R+ +D +IK AYRK+A+KYHPD+N +   A D FKE   +Y ILSD  KR  YD  G   V
Sbjct:    3 KRDYYDVLGVNRDASDDDIKKAYRKLAMKYHPDRNPDSKEAEDKFKEVKEAYEILSDSQKRGAYDQFGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURVG (Chaperone protein dnaJ OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N ++  A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURTA (Chaperone protein dnaJ OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDSQKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTN (Chaperone protein dnaJ OS=Bacteroides thetaiotaomicron GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVL V++  T +EIK AYRK A++YHPDKN  D  A + FKE   +Y++LS+PDKR +YD  G   V
Sbjct:    4 KRDYYEVLEVTKTATVEEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSNPDKRSRYDQFGHAGV 75          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIF5 (Chaperone protein dnaJ OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            RD YEVL +SR   D EIK +YR++A++YHPD+N +D  A + FKE + +Y +LSDP KR+ YD  G   V
Sbjct:    4 RDYYEVLEISRTADDGEIKKSYRRLAMRYHPDRNPDDASAEERFKEISAAYEVLSDPQKRQAYDRFGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIF2 (Chaperone protein dnaJ OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            RD YEVL +SR   D EIK +YR++A++YHPD+N +D  A + FKE + +Y +LSDP KR+ YD  G   V
Sbjct:    4 RDYYEVLEISRTADDGEIKKSYRRLAMRYHPDRNPDDASAEERFKEISAAYEVLSDPQKRQAYDRFGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ1_THET8 (Chaperone protein dnaJ 1 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +D Y +LGVSR  + +EIK AYR++ALKYHPD+N  D  A + FKE   +Y +LSDP KR  YD    EA
Sbjct:    2 KDYYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDKEAEERFKEINEAYAVLSDPKKRAAYDRGHLEA 71          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PSEF59.629e-1550.00Chaperone protein dnaJ OS=Pseudomonas fluorescens ... [more]
DNAJ_NITEU9.629e-1556.06Chaperone protein dnaJ OS=Nitrosomonas europaea GN... [more]
DNAJ_CLOAB9.629e-1552.24Chaperone protein dnaJ OS=Clostridium acetobutylic... [more]
DNAJ_CHRVO9.629e-1552.78Chaperone protein dnaJ OS=Chromobacterium violaceu... [more]
DNAJ_BURVG9.629e-1552.78Chaperone protein dnaJ OS=Burkholderia vietnamiens... [more]
DNAJ_BURTA9.629e-1552.78Chaperone protein dnaJ OS=Burkholderia thailandens... [more]
DNAJ_BACTN9.629e-1552.78Chaperone protein dnaJ OS=Bacteroides thetaiotaomi... [more]
DNAJ_ACIF59.629e-1550.70Chaperone protein dnaJ OS=Acidithiobacillus ferroo... [more]
DNAJ_ACIF29.629e-1550.70Chaperone protein dnaJ OS=Acidithiobacillus ferroo... [more]
DNAJ1_THET89.629e-1552.86Chaperone protein dnaJ 1 OS=Thermus thermophilus (... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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