CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURP1 (Chaperone protein dnaJ OS=Burkholderia pseudomallei (strain 1710b) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURP0 (Chaperone protein dnaJ OS=Burkholderia pseudomallei (strain 1106a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURMS (Chaperone protein dnaJ OS=Burkholderia mallei (strain SAVP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURMA (Chaperone protein dnaJ OS=Burkholderia mallei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM9 (Chaperone protein dnaJ OS=Burkholderia mallei (strain NCTC 10229) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM7 (Chaperone protein dnaJ OS=Burkholderia mallei (strain NCTC 10247) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCM (Chaperone protein dnaJ OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCJ (Chaperone protein dnaJ OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCH (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain HI2424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
[Close]
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCC (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain MC0-3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BURP11.258e-1452.78Chaperone protein dnaJ OS=Burkholderia pseudomalle... [more]
DNAJ_BURP01.258e-1452.78Chaperone protein dnaJ OS=Burkholderia pseudomalle... [more]
DNAJ_BURMS1.258e-1452.78Chaperone protein dnaJ OS=Burkholderia mallei (str... [more]
DNAJ_BURMA1.258e-1452.78Chaperone protein dnaJ OS=Burkholderia mallei GN=d... [more]
DNAJ_BURM91.258e-1452.78Chaperone protein dnaJ OS=Burkholderia mallei (str... [more]
DNAJ_BURM71.258e-1452.78Chaperone protein dnaJ OS=Burkholderia mallei (str... [more]
DNAJ_BURCM1.258e-1452.78Chaperone protein dnaJ OS=Burkholderia ambifaria (... [more]
DNAJ_BURCJ1.258e-1452.78Chaperone protein dnaJ OS=Burkholderia cepacia (st... [more]
DNAJ_BURCH1.258e-1452.78Chaperone protein dnaJ OS=Burkholderia cenocepacia... [more]
DNAJ_BURCC1.258e-1452.78Chaperone protein dnaJ OS=Burkholderia cenocepacia... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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