CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCA (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain AU 1054) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURA4 (Chaperone protein dnaJ OS=Burkholderia ambifaria (strain MC40-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBU (Chaperone protein dnaJ OS=Borrelia burgdorferi GN=dnaJ PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +++D YE+LG+S+  +  EIK AYRK+A+KYHPD+N  +  AA IFKE T +Y IL D +K+ +YD  G  A
Sbjct:    1 MKKDYYEILGLSKGASKDEIKKAYRKIAIKYHPDRNQGNEEAASIFKEATQAYEILIDDNKKAKYDRFGHSA 72          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DJC18_MACFA (DnaJ homolog subfamily C member 18 OS=Macaca fascicularis GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            R+ YE+LGVSR+ +D+E+K AYRK+ALK+HPDKN   P A D FK    ++ +LS+PDKR +YD  G E V
Sbjct:   81 RNYYEILGVSRDASDEELKKAYRKLALKFHPDKNC-APGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQV 150          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DJC18_HUMAN (DnaJ homolog subfamily C member 18 OS=Homo sapiens GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            R+ YE+LGVSR+ +D+E+K AYRK+ALK+HPDKN   P A D FK    ++ +LS+PDKR +YD  G E V
Sbjct:   81 RNYYEILGVSRDASDEELKKAYRKLALKFHPDKNC-APGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQV 150          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DJC18_BOVIN (DnaJ homolog subfamily C member 18 OS=Bos taurus GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            R+ YE+LGVSR+ +D+E+K AYRK+ALK+HPDKN   P A D FK    ++ +LS+PDKR +YD  G E V
Sbjct:   81 RNYYEILGVSRDASDEELKKAYRKLALKFHPDKNC-APGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQV 150          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEH (Chaperone protein dnaJ OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKN---ANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV +N +D EIK AYRK+A+KYHPD+N    +  +A + FKE   +Y +LSDP+K+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPEGKDGKIAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGV 77          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_NITEC (Chaperone protein dnaJ OS=Nitrosomonas eutropha (strain C91) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            +RD YEVLGV R+  + E+K  YRK+A+KYHPD+NA D  A + FKE   +Y +LSD +KR  YD  G
Sbjct:    3 QRDYYEVLGVGRDADESELKKVYRKLAMKYHPDRNAGDAKAEERFKEIKEAYEVLSDSNKRAAYDQFG 70          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURS3 (Chaperone protein dnaJ OS=Burkholderia sp. (strain 383) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N  D EIK AYRK+A+KYHPD+N ++  A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNAGDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEVKEAYEMLSDGQKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPD (Chaperone protein dnaJ OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N TD E+K AYRK+A+K+HPD+N ++  A + FKE   +Y +L D  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNATDDELKKAYRKLAMKHHPDRNPDNKDAEEKFKEIKEAYEVLGDEQKRAAYDRYGHAGV 74          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BURCA1.258e-1452.78Chaperone protein dnaJ OS=Burkholderia cenocepacia... [more]
DNAJ_BURA41.258e-1452.78Chaperone protein dnaJ OS=Burkholderia ambifaria (... [more]
DNAJ_BORBU1.258e-1450.00Chaperone protein dnaJ OS=Borrelia burgdorferi GN=... [more]
DJC18_MACFA1.258e-1454.93DnaJ homolog subfamily C member 18 OS=Macaca fasci... [more]
DJC18_HUMAN1.258e-1454.93DnaJ homolog subfamily C member 18 OS=Homo sapiens... [more]
DJC18_BOVIN1.258e-1454.93DnaJ homolog subfamily C member 18 OS=Bos taurus G... [more]
DNAJ_RALEH1.642e-1450.67Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]
DNAJ_NITEC1.642e-1452.94Chaperone protein dnaJ OS=Nitrosomonas eutropha (s... [more]
DNAJ_BURS31.642e-1452.78Chaperone protein dnaJ OS=Burkholderia sp. (strain... [more]
DNAJ_BORPD1.642e-1450.00Chaperone protein dnaJ OS=Bordetella petrii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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