CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BORGA (Chaperone protein dnaJ OS=Borrelia garinii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +++D YE+LG+S+  +  EIK AYRK+A+KYHPD+N  +  AA IFKE T +Y +L D +K+ +YD  G  A
Sbjct:    1 MKKDYYEILGLSKGASKDEIKKAYRKIAIKYHPDRNQGNEEAASIFKEATQAYEVLIDDNKKAKYDRFGHSA 72          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ2_AZOSE (Chaperone protein dnaJ 2 OS=Azoarcus sp. (strain EbN1) GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV+R+ +D EIK AYRK+A+K+HPD+N ++  + D FKE   +Y ILSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVNRDASDNEIKKAYRKLAMKHHPDRNPDNKDSEDHFKEAKNAYEILSDAQKRAAYDRYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DJB12_BOVIN (DnaJ homolog subfamily B member 12 OS=Bos taurus GN=DNAJB12 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            +D YE+LGVSR  +D+++K AYRK+ALK+HPDKN + P A + FK    +Y +LS+P+KR+QYD  G
Sbjct:  109 KDYYEILGVSRGASDEDLKKAYRKLALKFHPDKN-HAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG 174          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: YR260_MIMIV (DnaJ-like protein R260 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R260 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 35/70 (50.00%), Postives = 53/70 (75.71%), Query Frame = 1
Query:  256 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            D YE+LG++ + ++++IK AYRK+A+KYHPDKN  +P A ++FK+   + +ILS+ +KRR YD  G EAV
Sbjct:    7 DLYEILGLTPSASEEDIKKAYRKLAIKYHPDKNKGNPEAEEMFKKINHANSILSNSEKRRVYDQYGEEAV 76          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEJ (Chaperone protein dnaJ OS=Ralstonia eutropha (strain JMP134) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV +N +D EIK AYRK+A+KYHPD+N +   + + FKE   +Y +LSD +K+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDSKESEEKFKEVKEAYEMLSDAEKKAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAE (Chaperone protein dnaJ OS=Pseudomonas aeruginosa GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFS 543
            +RD YEVLGV R  ++ ++K AYR++A+KYHPD+N  D  A D FKE   +Y +LSD  KR  YD  G   V               + + +F  +FS
Sbjct:    3 KRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFS 100          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAB (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFS 543
            +RD YEVLGV R  ++ ++K AYR++A+KYHPD+N  D  A D FKE   +Y +LSD  KR  YD  G   V               + + +F  +FS
Sbjct:    3 KRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFS 100          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA8 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain LESB58) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFS 543
            +RD YEVLGV R  ++ ++K AYR++A+KYHPD+N  D  A D FKE   +Y +LSD  KR  YD  G   V               + + +F  +FS
Sbjct:    3 KRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFS 100          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA7 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain PA7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFS 543
            +RD YEVLGV R  ++ ++K AYR++A+KYHPD+N  D  A D FKE   +Y +LSD  KR  YD  G   V               + + +F  +FS
Sbjct:    3 KRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFS 100          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_METCA (Chaperone protein dnaJ OS=Methylococcus capsulatus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            + D YE LGV RN +D +IK A+R++A+KYHPD+N ++P A + FK    +Y++LSDP KR  YD  G   +
Sbjct:    3 KEDYYETLGVPRNASDSDIKKAFRRLAMKYHPDRNKDNPEAEERFKSVKEAYDVLSDPKKRSAYDQFGHAGI 74          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BORGA1.642e-1448.61Chaperone protein dnaJ OS=Borrelia garinii GN=dnaJ... [more]
DNAJ2_AZOSE1.642e-1452.78Chaperone protein dnaJ 2 OS=Azoarcus sp. (strain E... [more]
DJB12_BOVIN1.642e-1453.73DnaJ homolog subfamily B member 12 OS=Bos taurus G... [more]
YR260_MIMIV2.145e-1450.00DnaJ-like protein R260 OS=Acanthamoeba polyphaga m... [more]
DNAJ_RALEJ2.145e-1450.00Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]
DNAJ_PSEAE2.145e-1439.80Chaperone protein dnaJ OS=Pseudomonas aeruginosa G... [more]
DNAJ_PSEAB2.145e-1439.80Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PSEA82.145e-1439.80Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PSEA72.145e-1439.80Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_METCA2.145e-1447.22Chaperone protein dnaJ OS=Methylococcus capsulatus... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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