CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12075 contig Ccv1_Contig12075:55..660. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOK5 (Chaperone protein dnaJ OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            ++D YE+LG+ +  +DQ+IK A+RK+ALKYHPD+N ND  A + FKE   +Y +L+DP K+ QYD  G
Sbjct:    3 KKDYYEILGLDKGASDQDIKKAFRKLALKYHPDRNPNDKKAEEKFKEINEAYQVLTDPQKKAQYDQFG 70          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBY (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AYE) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBT (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBS (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain SDF) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A + FKE + +Y ILSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_HERAR (Chaperone protein dnaJ OS=Herminiimonas arsenicoxydans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.137e-15
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLG 552
            +RD YE+LG+ +N +D+EIK AYRK+A+K+HPD+N +   A D FKE   +Y +LSDP KR  YD  G   V               A   +F  +F + G
Sbjct:    3 KRDFYEILGLGKNASDEEIKKAYRKLAMKHHPDRNPDSKGAEDKFKEAKEAYEMLSDPQKRDAYDRYGHAGVDPNMGGGGGGGGFADAFGDIFGDIFGQAG 103          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOPE (Chaperone protein dnaJ OS=Clostridium perfringens GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.137e-15
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLG+ +  +D EIK A+RKMA+KYHPD+N  D  A + FKE   +Y++L DPDK+ +YD  G  A
Sbjct:    3 KRDYYEVLGLQKGASDDEIKRAFRKMAMKYHPDRNPGDKEAEENFKEVNEAYDVLKDPDKKAKYDQFGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15
Identity = 39/71 (54.93%), Postives = 47/71 (66.20%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            ++D YE+LGV RN + +EIK AYR++A KYHPD N  D  A   FKE   +Y ILSDP KR QYD  G  A
Sbjct:    3 KKDLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAA 73          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CLOK58.709e-1651.47Chaperone protein dnaJ OS=Clostridium kluyveri (st... [more]
DNAJ_ACIBY8.709e-1654.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBT8.709e-1654.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBS8.709e-1654.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBC8.709e-1654.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB58.709e-1654.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB38.709e-1654.93Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_HERAR1.137e-1540.59Chaperone protein dnaJ OS=Herminiimonas arsenicoxy... [more]
DNAJ_CLOPE1.137e-1552.11Chaperone protein dnaJ OS=Clostridium perfringens ... [more]
DNAJ_THETN1.486e-1554.93Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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