CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12075 contig Ccv1_Contig12075:55..660. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRCR (Chaperone protein dnaJ OS=Ehrlichia chaffeensis (strain Arkansas) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            + D Y++LGVS++ T +EIK AYRKMALKYHPDKN  +  A + FKE + +Y++L D DKR  YD  G  A
Sbjct:    3 KSDYYDLLGVSKSATPEEIKKAYRKMALKYHPDKNPGNKEAEEKFKELSEAYDVLIDQDKRAAYDKYGHNA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVV (Chaperone protein dnaJ OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV+R+ ++ +IK AYRK+AL+YHPD+N +DP A   FKE   +Y++L D +KR +YD  G   V
Sbjct:    3 QRDYYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDPEAEQKFKEAAEAYDVLRDGEKRARYDRFGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVM (Chaperone protein dnaJ OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            +RD YEVLGV+R+ ++ EIK  YRK+AL+YHPD+N ++P A  +FKE   +Y++L D DKR +YD  G
Sbjct:    3 QRDYYEVLGVARDASEDEIKRQYRKLALQYHPDRNPDNPEAEQMFKEAAEAYDVLRDADKRARYDRFG 70          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVH (Chaperone protein dnaJ OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV+R+ ++ +IK AYRK+AL+YHPD+N +DP A   FKE   +Y++L D +KR +YD  G   V
Sbjct:    3 QRDYYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDPEAEQKFKEAAEAYDVLRDGEKRARYDRFGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_CUPTR (Chaperone protein dnaJ OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV +N +D EIK AYRK+A+K+HPD+N +   A + FKE   +Y +LSDP+K+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKFHPDRNPDSKDAEEKFKEAKEAYEMLSDPEKKAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM1 (Chaperone protein dnaJ OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N ++  A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEVKEAYEMLSDSQKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BARQU (Chaperone protein dnaJ OS=Bartonella quintana GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            ++ D YE+LGV+R C D+++KSA+RK+A++YHPD+NA D  A   FKE   +Y +L DP KR  YD  G  A
Sbjct:    1 MKVDYYEILGVTRECDDKKLKSAFRKLAMQYHPDRNAGDKEAERRFKEIGEAYEVLKDPQKRAAYDRFGHAA 72          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BARHE (Chaperone protein dnaJ OS=Bartonella henselae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            ++ D YE+LGV+R C D+++KSA+RK+A++YHPD+NA D  A   FKE   +Y +L DP KR  YD  G  A
Sbjct:    1 MKVDYYEILGVTRECDDKKLKSAFRKLAMQYHPDRNAGDKEAERKFKEIGEAYEVLKDPQKRAAYDRFGHAA 72          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            ++D YE+LGV RN T++EIK AYR++A +YHPD N  +  A + FKE   +Y +LSDP+KR+ YD  G  A
Sbjct:    4 KKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLYDQFGHAA 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJH_SYNY3 (DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803) GN=slr0093 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            +D Y++LGV++  ++ EIK  +RK+ALKYHPDKN  D  A + FKE + +Y +LSDP+KR++YD  G
Sbjct:    7 KDYYQILGVTKTASEAEIKKQFRKLALKYHPDKNPGDKAAEEKFKEISEAYEVLSDPEKRQKYDQFG 73          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_EHRCR5.645e-1553.52Chaperone protein dnaJ OS=Ehrlichia chaffeensis (s... [more]
DNAJ_DESVV5.645e-1551.39Chaperone protein dnaJ OS=Desulfovibrio vulgaris s... [more]
DNAJ_DESVM5.645e-1552.94Chaperone protein dnaJ OS=Desulfovibrio vulgaris (... [more]
DNAJ_DESVH5.645e-1551.39Chaperone protein dnaJ OS=Desulfovibrio vulgaris (... [more]
DNAJ_CUPTR5.645e-1551.39Chaperone protein dnaJ OS=Cupriavidus taiwanensis ... [more]
DNAJ_BURM15.645e-1552.78Chaperone protein dnaJ OS=Burkholderia multivorans... [more]
DNAJ_BARQU5.645e-1550.00Chaperone protein dnaJ OS=Bartonella quintana GN=d... [more]
DNAJ_BARHE5.645e-1550.00Chaperone protein dnaJ OS=Bartonella henselae GN=d... [more]
DNAJ_ANATD5.645e-1550.70Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNAJH_SYNY35.645e-1550.75DnAJ-like protein slr0093 OS=Synechocystis sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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