CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12075 contig Ccv1_Contig12075:55..660. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DJB12_MOUSE (DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 40/80 (50.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query:  220 SERSDAGKQLR--RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            SE+  A K+++  +D YE+LGVSR+ +D+++K AYRK+ALK+HPDKN + P A + FK    +Y +LS+P+KR+QYD  G
Sbjct:   97 SEQVAAVKRVKQCKDYYEILGVSRSASDEDLKKAYRKLALKFHPDKN-HAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG 175          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_XANOR (Chaperone protein dnaJ OS=Xanthomonas oryzae pv. oryzae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV+R  +D+E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_XANOP (Chaperone protein dnaJ OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV+R  +D+E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_XANOM (Chaperone protein dnaJ OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV+R  +D+E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_XANC5 (Chaperone protein dnaJ OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV+R  +D+E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_XANAC (Chaperone protein dnaJ OS=Xanthomonas axonopodis pv. citri GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV+R  +D+E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBHB (Chaperone protein dnaJ OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV R+ ++++IK AY+++A+K+HPD+N  D  AAD FKE   +Y IL+DP K+  YD  G  A
Sbjct:    3 KRDFYEVLGVGRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEST (Chaperone protein dnaJ OS=Pseudomonas stutzeri GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV R  ++ E+K AYR++A+K+HPD+N  D  A + FKE   +Y +LSDP KR  YD  G   V
Sbjct:    3 KRDFYEVLGVERGASEAELKKAYRRLAMKHHPDRNPGDKAAEEAFKEANEAYEVLSDPSKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBF1 (Chaperone protein dnaJ OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVSR+ ++++IK AY+++A+K+HPD+N  D  AA+ FKE   +Y IL+D  KR  YD  G  A
Sbjct:    3 KRDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDDTAAEKFKEVKVAYEILTDAQKRSAYDQYGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_THET2 (Chaperone protein dnaJ OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +D Y +LGVSR  + +EIK AYR++ALKYHPD+N  D  A + FKE   +Y +LSDP KR  YD    EA
Sbjct:    2 KDYYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDKEAEERFKEINEAYAVLSDPKKRAAYDRGHLEA 71          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DJB12_MOUSE5.645e-1550.00DnaJ homolog subfamily B member 12 OS=Mus musculus... [more]
DNAJ_XANOR7.373e-1552.11Chaperone protein dnaJ OS=Xanthomonas oryzae pv. o... [more]
DNAJ_XANOP7.373e-1552.11Chaperone protein dnaJ OS=Xanthomonas oryzae pv. o... [more]
DNAJ_XANOM7.373e-1552.11Chaperone protein dnaJ OS=Xanthomonas oryzae pv. o... [more]
DNAJ_XANC57.373e-1552.11Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANAC7.373e-1552.11Chaperone protein dnaJ OS=Xanthomonas axonopodis p... [more]
DNAJ_VIBHB7.373e-1550.70Chaperone protein dnaJ OS=Vibrio harveyi (strain A... [more]
DNAJ_PSEST7.373e-1550.00Chaperone protein dnaJ OS=Pseudomonas stutzeri GN=... [more]
DNAJ_VIBF19.629e-1550.70Chaperone protein dnaJ OS=Vibrio fischeri (strain ... [more]
DNAJ_THET29.629e-1552.86Chaperone protein dnaJ OS=Thermus thermophilus (st... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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