CX291033

Overview
NameCX291033
Unique NameCX291033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length452
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291033 vs. ExPASy Swiss-Prot
Match: PRSA_GEOKA (Foldase protein prsA OS=Geobacillus kaustophilus GN=prsA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 40/94 (42.55%), Postives = 51/94 (54.26%), Query Frame = 1
Query:   97 VKARHILCEKQGNINEAYKKLQDGWLSNGDKVPQAEFSKIAAEYSECP-SGKKGGDLGWFPRGKMAGPFQEVAFNTPVGVTSAPFKSTHGYHII 375
            ++A HIL + +    E   KL  G           +FSK+A EYS+ P S   GGDLGWF  GKM   F+E A+   VG  S P K+ +GYHII
Sbjct:  136 IRASHILVKDEKTAKEVKAKLDKG----------EDFSKLAKEYSQDPGSASNGGDLGWFGPGKMVKEFEEAAYKLKVGEVSDPVKTDYGYHII 219          
BLAST of CX291033 vs. ExPASy Swiss-Prot
Match: PRSA_OCEIH (Foldase protein prsA OS=Oceanobacillus iheyensis GN=prsA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.208e-12
Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   91 TYVKARHILCEKQGNINEAYKKLQDGWLSNGDKVPQAEFSKIAAEYS-ECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPVGVTSAPFKSTHGYHII 375
            T ++A+HIL E + ++ E  +K++DG           +F ++A EYS +  S + GGDLG+F  G M   F+E AF+   G  S P +STHG HII
Sbjct:  138 TEIQAQHILLENEEDVAEVQQKIEDG----------EDFGELAQEYSTDTGSAENGGDLGYFSAGSMVPEFEEAAFSLEAGEISDPVQSTHGTHII 223          
BLAST of CX291033 vs. ExPASy Swiss-Prot
Match: PIN4_ASPFU (Peptidyl-prolyl cis-trans isomerase pin4 OS=Aspergillus fumigatus GN=pin4 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 42/109 (38.53%), Postives = 57/109 (52.29%), Query Frame = 1
Query:   79 LGTCTYVKARHILCEKQGNINEAYKKLQDGWLSNGDKVPQAEFSKIAAEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPVGVTSAP----FKSTHGYHIILCEGRK 393
            L   T +  RHILCEK     EA +KL++G          A+F  +A EYSE    ++GG LGW  RG +   F++ A+      T+ P     K+  GYHII+ EGRK
Sbjct:   32 LKPATSINVRHILCEKFSKKEEALEKLRNG----------AKFDDVAREYSE-DKARQGGSLGWKVRGSLNADFEKAAYELEPSTTANPKYVEVKTGFGYHIIMVEGRK 129          
BLAST of CX291033 vs. ExPASy Swiss-Prot
Match: PRSA_BACHD (Foldase protein prsA OS=Bacillus halodurans GN=prsA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.766e-12
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 1
Query:   97 VKARHILCEKQGNINEAYKKLQDGWLSNGDKVPQAEFSKIAAEYSECPSGK-KGGDLGWFPRGKMAGPFQEVAFNTPVGVTSAPFKSTHGYHIILCEGRKN 396
            V+A HIL E +    E   +L+ G           +F+++A+EYS  PS +   GDLG+F +G M   F+E AFN  +   S P +ST+GYHIIL   RK+
Sbjct:  158 VEASHILVEDEETAEEVLDRLEAG----------DDFAELASEYSVDPSAEANNGDLGFFGKGDMVPEFEEAAFNMEIDEVSEPVESTYGYHIILVTDRKD 248          
BLAST of CX291033 vs. ExPASy Swiss-Prot
Match: PRSA_GEOSW (Foldase protein prsA OS=Geobacillus sp. (strain WCH70) GN=prsA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 1
Query:   97 VKARHILCEKQGNINEAYKKLQDGWLSNGDKVPQAEFSKIAAEYSECP-SGKKGGDLGWFPRGKMAGPFQEVAFNTPVGVTSAPFKSTHGYHII 375
            ++A HIL + +    E   KL  G           +F+K+A +YS+ P S   GGDLGWF  GKM   F++ A+   VG  S P K+ +GYHII
Sbjct:  136 IRASHILVKDEKTAEEIKTKLDKG----------EDFAKLAKQYSQDPGSAPNGGDLGWFGPGKMVKEFEDAAYKLKVGQVSDPVKTDYGYHII 219          
BLAST of CX291033 vs. ExPASy Swiss-Prot
Match: PRSA_THETN (Foldase protein prsA OS=Thermoanaerobacter tengcongensis GN=prsA PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.102e-11
Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 1
Query:   97 VKARHILCEKQGNINEAYKKLQDGWLSNGDKVPQAEFSKIAAEYS-ECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPVGVTSAPFKSTHGYHIILCEG 387
            ++ARHIL   +    + Y++L  G           +F+ +A EYS +  +   GGDLG FP G M   F+E AF+  +G  S P K+ +GYHII  EG
Sbjct:  168 MRARHILVADEKTAEDIYQRLMKG----------EDFAALAKEYSIDTATKDNGGDLGEFPHGVMVPEFEEAAFSLKLGEISKPVKTQYGYHIIKSEG 255          
The following BLAST results are available for this feature:
BLAST of CX291033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PRSA_GEOKA9.909e-1342.55Foldase protein prsA OS=Geobacillus kaustophilus G... [more]
PRSA_OCEIH2.208e-1239.58Foldase protein prsA OS=Oceanobacillus iheyensis G... [more]
PIN4_ASPFU2.883e-1238.53Peptidyl-prolyl cis-trans isomerase pin4 OS=Asperg... [more]
PRSA_BACHD3.766e-1239.60Foldase protein prsA OS=Bacillus halodurans GN=prs... [more]
PRSA_GEOSW1.869e-1139.36Foldase protein prsA OS=Geobacillus sp. (strain WC... [more]
PRSA_THETN7.102e-1137.76Foldase protein prsA OS=Thermoanaerobacter tengcon... [more]

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Properties
Property NameValue
Genbank descriptionC03003B09SK OF2 Citrus clementina cDNA clone C03003B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291033 ID=CX291033; Name=CX291033; organism=Citrus clementina; type=EST; length=452bp
AAGGGTAAAGGAAAACAGGCAGCTGGTGGAGCTGATGATTCAAAGGGTAA
AGGAAAAGGCGGGAAGTCAGCTGATGGCCTCGGCACCTGCACATATGTCA
AAGCACGACACATCTTATGTGAGAAGCAAGGGAATATCAATGAGGCATAC
AAGAAGCTGCAAGATGGTTGGCTGAGCAATGGGGACAAGGTTCCACAAGC
TGAGTTTTCAAAGATAGCTGCAGAATACTCAGAATGCCCGTCAGGAAAGA
AGGGTGGAGATCTTGGATGGTTTCCACGTGGAAAGATGGCTGGCCCATTT
CAGGAAGTTGCCTTCAATACTCCTGTTGGAGTTACCAGTGCACCTTTCAA
GTCTACGCATGGATACCACATAATCTTGTGTGAAGGGAGGAAGAATTGAT
CGGAAACAGTATGCCAATGAAGGGAATCTCTGAAGGGCGAGCATGGAGAT
GA
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