CX291041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC18_ORYSJ (Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29 Identity = 78/209 (37.32%), Postives = 119/209 (56.94%), Query Frame = 3 Query: 6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSEN--QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGAS-TANPI---MPALPAYNDTPTAYTFYSNITGLS--GGPQWVPCPRRVDERM 608 K+VPI++GEWW D++++ +R + G + TING+ GDL CS +++ L V++G++YLLR+IN AL ++ +FK+A H FTVV D Y PY TD+V +APG+ DVL+ D P L + T+RG++ Y GA+ +N + MP +P ++T +Y F N+TGL+ Q P VDER+ Sbjct: 162 KDVPIIIGEWWELDLIEL-DRRMLDGNFDDNPLSATINGKLGDLSNCSSTVEESFVLDVKRGESYLLRVINTALFSEYYFKVAGHTFTVVGADGNYLTPYKTDMVTVAPGEAIDVLMFTDAPPAYYHMVALANQPPPPDLQIPQL-TSRGLIRYAGAAMDSNNLPMPMPVMPDQHNTMPSYYFRRNLTGLALPEQQQRHRVPAHVDERL 368
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSJ (Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.998e-28 Identity = 76/207 (36.71%), Postives = 112/207 (54.11%), Query Frame = 3 Query: 6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTAN---PI-MPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608 K+VPI++GEWW D++++ R A TING+ GDL CS +++ L V+ G++YLLR+IN A ++ +FK+A H FTVV D Y P+ TD+V +APG+ DVL+ AD P +RG+V Y G N P+ MP +P ++T +Y F++N+TGL P+ P VDER+ Sbjct: 156 KDVPIIIGEWWELDLVELDRRMRDGNFDDNPLSA-TINGKLGDLSNCSGIVEESFVLNVKHGESYLLRVINTAFFSEYYFKVAGHTFTVVGADGNYLTPFKTDMVTVAPGEAIDVLMVADAPPAHYHMIALANQPPEPD-PQIPKYISRGLVRYTGVDANNNGLPVPMPIMPNQHNTMPSYYFHANLTGLM-HPKHRRVPMHVDERI 359
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSI (Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28 Identity = 76/207 (36.71%), Postives = 112/207 (54.11%), Query Frame = 3 Query: 6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTAN---PI-MPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608 K+VPI++GEWW D++++ R A TING+ GDL CS +++ L V+ G++YLLR+IN A ++ +FK+A H FTVV D Y P+ TD+V +APG+ DVL+ AD P +RG+V Y A N P+ MP +P ++T +Y F++N+TGL P+ P VDER+ Sbjct: 156 KDVPIIIGEWWELDLVELDRRMRDGNFDDNPLSA-TINGKLGDLSNCSGIVEESFVLNVKHGESYLLRVINTAFFSEYYFKVAGHTFTVVGADGNYLTPFKTDMVTVAPGEAIDVLMVADAPPAHYHMIVLANQPPEPD-PQIPEYISRGLVRYTSADANNNGLPVPMPIMPNQHNTMPSYYFHANLTGLM-HPKHRRVPMHVDERI 359
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC16_ORYSJ (Putative laccase-16 OS=Oryza sativa subsp. japonica GN=LAC16 PE=5 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.859e-25 Identity = 71/202 (35.15%), Postives = 95/202 (47.03%), Query Frame = 3 Query: 3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGS---XXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANPIMP-----ALPAYNDTPTAYTFYSNITGLSGGPQWVPC 584 DKE+PI+L EWWNDD+ +V + + TG GD +G TYLLR+IN L N +FF +A H TVV++DA YT P D ++IAPGQT DVLL+A++ +GS + FN +T IV Y + TA P P LPA D A F + ++PC Sbjct: 97 DKEIPIILSEWWNDDVENVLDEAKRTG---------------GD---------------QGNTYLLRVINTGLTNDMFFAVAGHCLTVVSIDARYTKPLTVDYIMIAPGQTMDVLLEANRTLGSNSRYYMAARAFITLPVDTIPFNNSTATAIVEYTDSPTARPPGPPEFPLLLPAIKDEDAAMAFVDERMLIDIDVNFLPC 268
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC3_THACU (Laccase-3 OS=Thanatephorus cucumeris GN=LCC3 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.046e-13 Identity = 43/123 (34.96%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGR---PGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQ 362 D++ +++G+W++ + G IT P D+ TING+ D P + N Y LKV++GK Y LR+IN++ I HK TV+A D T PY D I GQ D +++A+Q Sbjct: 159 DEKTVLIIGDWYHTSSKAILATGNITLQQP---DSATINGKGRFDPDNTPANPNTLYTLKVKRGKRYRLRVINSSAIASFRMSIQGHKMTVIAADGVSTKPYQVDSFDILAGQRIDAVVEANQ 278
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC1_THACU (Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.008e-12 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGR---PGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQ 362 D++ +++G+W+++ + G IT P + TING+ D P + + Y LKV++GK Y LR+IN++ F + HK TV+A D T PY D I GQ D +++A+Q Sbjct: 159 DEKTVLIIGDWYHESSKAILASGNITRQRPVSA---TINGKGRFDPDNTPANPDTLYTLKVKRGKRYRLRVINSSEIASFRFSVEGHKVTVIAADGVSTKPYQVDAFDILAGQRIDCVVEANQ 278 The following BLAST results are available for this feature:
BLAST of CX291041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291041 ID=CX291041; Name=CX291041; organism=Citrus clementina; type=EST; length=609bpback to top |