CX291053

Overview
NameCX291053
Unique NameCX291053
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length481
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.035e-49
Identity = 89/139 (64.03%), Postives = 104/139 (74.82%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCN 479
            FDI N C  TVWAAA PGGGRQL+ GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN
Sbjct:   28 FDIVNQCTYTVWAAASPGGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCN 164          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 5.921e-49
Identity = 87/141 (61.70%), Postives = 108/141 (76.60%), Query Frame = 3
Query:   66 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCN 479
            ++ NNCP TVWAA+ P GGGR+L++GQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCN 165          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 1.117e-47
Identity = 88/141 (62.41%), Postives = 106/141 (75.18%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCN 479
            F + N CP TVWAA+VP GGGRQL++G++W ITA  GT AARIWART C+FDASG+G C TGDC G+L+C GYG APNTLAEYALKQFN++DF D+S IDGFNVPM F     S C+R  +C  ++   CP EL+  G CN
Sbjct:   24 FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCN 164          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 7.238e-47
Identity = 86/141 (60.99%), Postives = 105/141 (74.47%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCN 479
            F + N CP TVWAA+VP GGGRQL++G++W ITA  GT AARIWART CQFDASG+G C TGDC G+++C GYG APNTLAEYALKQFN++DF D+S +DGFNVP  F     S C+R  +C  ++   CP EL+  G CN
Sbjct:    3 FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCN 143          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.281e-43
Identity = 82/146 (56.16%), Postives = 104/146 (71.23%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVPG------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCN 479
            F+I N C  TVWAAA  G      GGRQL+ G++WTI  EPGTK  +IWART C FD SG+G C TGDC GLL+C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM+FS  +  C R ++C A+I+G+CP +LK P GGCN
Sbjct:   25 FEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMDFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCN 168          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.196e-41
Identity = 81/146 (55.48%), Postives = 101/146 (69.18%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVPG------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCN 479
            F+I N C  TVWAAA  G      GGRQL+ G++WTI  EPGT   +IWART C FD SG G C+TGDC GLL C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM FS  +  C R ++C A+I+G+CP +LK P GGCN
Sbjct:    3 FEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCN 146          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.847e-40
Identity = 76/140 (54.29%), Postives = 93/140 (66.43%), Query Frame = 3
Query:   60 KFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCN 479
            KFDI N C  TVWAA +PGGG++LD+GQTWT+    GT +AR W RT C FDASGKG C+TGDC G L C   GA P TLAEY     +D D+ D+S +DGFN+P+  +  +  C     C A+I   CP+ELKV GGCN
Sbjct:   28 KFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAVPATLAEYTQ---SDQDYYDVSLVDGFNIPLAINPTNAQCT-APACKADINAVCPSELKVDGGCN 163          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.284e-27
Identity = 61/112 (54.46%), Postives = 68/112 (60.71%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVS 395
            F ITN C  TVW AA P GGG QL  GQTWTI    GT + R+W RT C FD SG+G C TGDC G L C   G  P TLAE+ +      DF D+S IDG+NV M FS  S
Sbjct:   29 FTITNRCSFTVWPAATPVGGGVQLSPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIG--GSQDFYDLSVIDGYNVAMSFSCSS 138          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 2.421e-26
Identity = 52/83 (62.65%), Postives = 59/83 (71.08%), Query Frame = 3
Query:   60 KFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEY 308
            KFDI N C  TVWAA +PGGG++LD+GQTWT+    GT +AR W RT C FDASGKG C+TGDC   L C   GA P TLAEY
Sbjct:   21 KFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCTVSGAVPATLAEY 103          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.049e-25
Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFS 386
            F+I NNC  T+W A +P GGG +L  GQT +I    GT+A RIWART C F+  G G C+TGDC G L C   G  P TLAE+ +   +  DF D+S IDGFN+ M+FS
Sbjct:   23 FNIKNNCGSTIWPAGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS 130          
The following BLAST results are available for this feature:
BLAST of CX291053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PRR2_TOBAC2.035e-4964.03Pathogenesis-related protein R minor form OS=Nicot... [more]
NP24_SOLLC5.921e-4961.70Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
ZEAM_MAIZE1.117e-4762.41Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
IAAT_MAIZE7.238e-4760.99Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
THM2_THADA8.281e-4356.16Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA1.196e-4155.48Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS3.847e-4054.29Pathogenesis-related protein OS=Juniperus ashei PE... [more]
TLP_ORYSJ1.284e-2754.46Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
PRR3_JUNVI2.421e-2662.65Pathogenesis-related protein (Fragment) OS=Juniper... [more]
PR1C_HORVU2.049e-2551.38Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]

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Properties
Property NameValue
Genbank descriptionC03003E04SK OF2 Citrus clementina cDNA clone C03003E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291053 ID=CX291053; Name=CX291053; organism=Citrus clementina; type=EST; length=481bp
CTCTTCCCATTTCTTCTGCTCTTCTTATTATCATTTCCATCACCCTGACT
CATGCTGCCAAATTCGATATCACAAACAATTGCCCCGACACCGTCTGGGC
CGCCGCTGTGCCCGGAGGCGGCAGGCAACTCGACAAGGGTCAAACATGGA
CCATCACCGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCGAACC
AAATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTGACTG
TAACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACCTTGG
CCGAGTACGCGTTGAAGCAATTTAATGACATGGATTTCATTGACATGTCC
AACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTCCCTC
ATGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGCCCGA
ATGAATTGAAGGTTCCTGGAGGATGTAACGG
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