CX291053

Overview
NameCX291053
Unique NameCX291053
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length481
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.054e-17
Identity = 58/146 (39.73%), Postives = 76/146 (52.05%), Query Frame = 3
Query:   69 ITNNCPDTVWAAAVPGGGRQ-LDKG----QTWTITAEPGTKA---ARIWARTKCQFDASGKGKCETGDCNGLLECQGY-GAAPNTLAEYALKQFN-DMDFIDMSNIDGFNVPM-----EFSSVSPSCNRVIKCTANILGECPNELK 461
            + NNCP T+W A  P  G   L++G     + T  + P   A    RIWART C +   GK  C TGDC G +EC G  GAAP TLA++ L   + D     +S +DGFN+P+     E   V P    V+ C AN+L  CP  L+
Sbjct:   33 LVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQ-HGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPLTVTPHEGKGVCP----VVGCRANLLESCPAVLQ 173          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.805e-17
Identity = 59/149 (39.60%), Postives = 74/149 (49.66%), Query Frame = 3
Query:   75 NNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAA-----------RIWARTKCQFDASGKGKCETGDC-NGLLECQGYGA-APNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPG 470
            NNCP  VW    PG      K Q  T   E  ++A+           R WART C  DASGK  C T DC +G + C G GA  P TLAE+ +      DF D+S +DGFN+PM   SV+P       +   C AN+   CP+EL+  G
Sbjct:   30 NNCPYMVW----PGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGDCKTASCPANVNAVCPSELQKKG 171          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.271e-16
Identity = 57/151 (37.75%), Postives = 75/151 (49.67%), Query Frame = 3
Query:   60 KFDITNNCPDTVWAAAVPGG--------GRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAA-PNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPG 470
            K   TN C  TVW   + G         G +L  G + ++ A P   + R + RT+C  DASGK  C T DC +G + C G GAA P TL E  +      DF D+S +DGFN+PM   SV+P       +   C A+I   CP  L+V G
Sbjct:   26 KITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDA-PSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPM---SVAPQGGTGKCKASTCPADINKVCPAPLQVKG 172          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.966e-16
Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 3
Query:   69 ITNNCPDTVWAAAV--------PGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQG-YGAAPNTLAEYAL-KQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKV 464
            + NNC ++VW   +          GG  L  G+   +    G  + R+W R  C FD+ G+G C TGDC G+L C G  GA P T+ E  L    + M F D+S +DGFN P+  ++V          C A++   CP+ L+V
Sbjct:   33 MVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGW-SGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEV 174          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.966e-16
Identity = 53/148 (35.81%), Postives = 76/148 (51.35%), Query Frame = 3
Query:   60 KFDITNNCPDTVWAAAV--------PGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCN-GLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKVPG 470
            K   TNNCP T+W   +        P  G  L    + T+  +   K  R WART+C  + SGK  CET DC+ G + C G GA P  +L E  +     MDF D+S +DG+N+P+  ++   + + +   C AN+   CP EL+V G
Sbjct:   24 KITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKG-RFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKG 169          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.472e-15
Identity = 51/140 (36.43%), Postives = 67/140 (47.86%), Query Frame = 3
Query:   75 NNCPDTVWAAAVPGGGRQLDKGQTWTITAE-------PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGA-APNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSV--SPSCNRVIKCTANILGECPNELKV 464
            N C   VW    P  G+ L  G  + + A        P   + R W R  C FD SG+G C TGDC G L C G G   P TLAE  L    ++DF D+S +DG+N+ M    V  S  C+    C +++   CP  L+V
Sbjct:   27 NKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP--ELDFYDVSLVDGYNLAMSIMPVKGSGQCS-YAGCVSDLNQMCPVGLQV 163          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.735e-14
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 3
Query:   87 DTVWAAAVPGGGR--------QLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAA-PNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKV 464
            +TVW   + G  +        +L    + ++ A P   + R W RT+C  DA+GK  CET DC +G + C G GA  P TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP +L+V
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDA-PSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNMACPAQLQV 136          
The following BLAST results are available for this feature:
BLAST of CX291053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
OLP1_SOLLC2.054e-1739.73Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLP_PRUAV7.805e-1739.60Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP1_PRUPE2.271e-1637.75Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLPH_ORYSJ2.966e-1634.27Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP1_CASSA2.966e-1635.81Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLPH_ARATH1.472e-1536.43Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TP1B_MALDO4.735e-1435.00Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]

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Properties
Property NameValue
Genbank descriptionC03003E04SK OF2 Citrus clementina cDNA clone C03003E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291053 ID=CX291053; Name=CX291053; organism=Citrus clementina; type=EST; length=481bp
CTCTTCCCATTTCTTCTGCTCTTCTTATTATCATTTCCATCACCCTGACT
CATGCTGCCAAATTCGATATCACAAACAATTGCCCCGACACCGTCTGGGC
CGCCGCTGTGCCCGGAGGCGGCAGGCAACTCGACAAGGGTCAAACATGGA
CCATCACCGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCGAACC
AAATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTGACTG
TAACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACCTTGG
CCGAGTACGCGTTGAAGCAATTTAATGACATGGATTTCATTGACATGTCC
AACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTCCCTC
ATGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGCCCGA
ATGAATTGAAGGTTCCTGGAGGATGTAACGG
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