CX291062

Overview
NameCX291062
Unique NameCX291062
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.116e-56
Identity = 105/187 (56.15%), Postives = 133/187 (71.12%), Query Frame = 2
Query:    8 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNES 568
            L   FY  +CP+    V+S V  AV++E RM ASL+RLHFHDCFV GCDGS+LLD + S   EK S PN  SARGFEVVD+IK+ +E  CP  VSCAD L +AAR S  + GGPSW V LGRRDS +ASL+ +N+  IP P +T + ++ RF  +GL   D+VALSG+HTIG +RC +FR R+YN+S
Sbjct:   36 LFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNN-IPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQS 221          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 8.041e-56
Identity = 106/197 (53.81%), Postives = 147/197 (74.62%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIY-NESNIESSFA 589
            AQLS  FY +TC   L+T++S++++A+S+ERRM ASL+RLHFHDCFVNGCD S++L  T +   E+ S  N  SARGFEV+D  KS VE VCPGVVSCADI+A+AAR +   +GGP ++VK+GRRDS  A  A A+   +P   ++L++L   F  KGL+ +D+VALSGAHT+GQA+C+ F+ R+Y N S+I++ F+
Sbjct:   19 AQLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRD-LPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSSDIDAGFS 214          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.056e-55
Identity = 107/187 (57.22%), Postives = 135/187 (72.19%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYN 562
            AQLS + Y+K+CP LL  V+  V+ A+  E RM ASL+RLHFHDCFVNGCD S+LLD T+S   EK + PN+NS RGFEV+D IK+ VE  CPGVVSCADIL +AAR SV + GGP W V LGR+D   A+ ++AN+  +P P   L  +I +F A GL+  D+VALSGAHT GQA+C  F NR++N
Sbjct:   28 AQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTNS---EKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANN--LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFN 209          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.056e-55
Identity = 105/187 (56.15%), Postives = 132/187 (70.59%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYN 562
            + L+  FY ++CP+L   VKS V  A   + R+ ASLLRLHFHDCFVNGCDGSILL+D+  F GEK + PN NS RGFEV++DIKS +E  CP  VSCADI+A+AAR +V + GGP W V LGRRDS TAS  AAN+  +P P   L N+  +F   GL  KD+V LSGAHTIG A+C   ++R++N
Sbjct:   46 SNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTN-LPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFN 231          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 6.807e-55
Identity = 102/187 (54.55%), Postives = 133/187 (71.12%), Query Frame = 2
Query:    8 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNES 568
            L   FY ++CPK    V+S V  A   + RM ASLLRLHFHDCFV GCD SILLD + +   EK S PN NSARGFE++++IK  +E+ CP  VSCADILA+AAR S  I GGPSW V LGRRD++ ASL+ +N+  IP P +T   ++ +F+ +GL   D+V+LSG+HTIG +RC +FR R+YN+S
Sbjct:   33 LFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNND-IPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQS 218          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.763e-54
Identity = 103/187 (55.08%), Postives = 127/187 (67.91%), Query Frame = 2
Query:    8 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNES 568
            L  +FY  +CP+    V+S V  A  +E RM ASL+RLHFHDCFV GCDGS+LLD + S   EK S PN  SARGFEVVD+IK+ +E  CP  VSCAD L +AAR S  + GGPSW V LGRRDS TAS A  N   +P P +    +  RF  +GL+  D+VALSG+HTIG +RC +FR R+YN+S
Sbjct:   35 LFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKD-LPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQS 220          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 7.526e-54
Identity = 106/187 (56.68%), Postives = 131/187 (70.05%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYN 562
            AQLS + Y+K+CP L+  V+  V  A+  E RM ASL+RLHFHDCFVNGCD S+LLD   S   EK + PNINSARGFEV+D IK+ VE  CPGVVSCADIL +AAR SV + GGP W V LGR+D   A+  +AN+  +P P   L  +I +F A  L+  D+VALSGAHT GQA+C  F NR++N
Sbjct:   28 AQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS---EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN--LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFN 209          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 9.830e-54
Identity = 114/197 (57.87%), Postives = 141/197 (71.57%), Query Frame = 2
Query:    5 QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTG-EKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIY-NESNIESSFA 589
            QLS+ FY  +CP+ L  +KS V +AVS + RMGASLLRLHFHDCF  GCD S+LL      TG E+ +GPN+ S RGF V+D+IK+++E VC   VSCADIL +AAR SV  LGGPSW V LGRRDS TAS + ANS  +P P+S+ S L   F  K L+  DMVALSGAHTIG+A+C  FR RIY  ++NI ++FA
Sbjct:   24 QLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL------TGMEQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSD-LPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYGGDTNINTAFA 211          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.190e-53
Identity = 101/189 (53.44%), Postives = 128/189 (67.72%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNES 568
            A LS  FY  +CP     V+S V +A   + RM AS+LRLHFHDCFVNGCD S+LLD + +   EK S  N +SARGFEV+D+IKS +E  CP  VSCAD+LA+ AR S+ I GGPSW V LGRRD++ ASL  +    IP P STL  ++  F  +GL   D+VAL G+HTIG +RC+ FR R+YN +
Sbjct:   39 ASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMEN-IPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHT 226          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.860e-53
Identity = 95/192 (49.48%), Postives = 138/192 (71.88%), Query Frame = 2
Query:    8 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESS 583
            L+ ++Y  TCP + + +K  ++  V ++ R  A ++RLHFHDCFV GCDGS+LLD+T +  GEK + PNINS +G+++VD IK+ +E  CPGVVSCAD+L I AR +  ++GGP W+V +GR+DSKTAS   A +  +P P   L ++I +F ++GLS +DMVAL GAHTIG+A+C  FR+RIY +  + S+
Sbjct:   30 LTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTN-LPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSA 220          
The following BLAST results are available for this feature:
BLAST of CX291062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER15_ARATH2.116e-5656.15Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER4_ARATH8.041e-5653.81Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PERN_ARMRU3.056e-5557.22Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER10_ARATH3.056e-5556.15Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER72_ARATH6.807e-5554.55Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER14_ARATH5.763e-5455.08Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER59_ARATH7.526e-5456.68Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER1_WHEAT9.830e-5457.87Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER36_ARATH2.190e-5353.44Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER11_ARATH2.860e-5349.48Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03003F02SK OF2 Citrus clementina cDNA clone C03003F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291062 ID=CX291062; Name=CX291062; organism=Citrus clementina; type=EST; length=590bp
TGCTCAACTCTCTACTAATTTCTATTCAAAAACTTGTCCAAAATTGTTGA
ATACGGTTAAATCTGCTGTTCAATCAGCAGTTTCAAAAGAGCGTCGGATG
GGCGCTTCTCTCCTTCGCTTACACTTTCATGACTGTTTCGTCAACGGGTG
TGATGGATCAATTCTACTAGATGACACGTCATCTTTCACTGGTGAGAAGA
CTTCAGGACCAAATATCAATTCAGCAAGAGGATTTGAAGTTGTTGATGAT
ATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGAGTCGTTTCATGCGCTGA
TATTTTAGCCATTGCTGCTCGGCATTCAGTTGCAATTCTAGGAGGGCCAA
GTTGGAATGTTAAACTTGGAAGAAGGGACTCCAAAACAGCTAGCTTAGCT
GCTGCTAATAGTGGTGTCATTCCTCCTCCTACCTCCACTCTAAGCAACCT
CATCAATAGATTCCAGGCTAAAGGTCTCTCTGCCAAGGACATGGTTGCTT
TATCCGGAGCGCATACAATTGGGCAAGCAAGGTGTGTAGCCTTCAGAAAT
CGCATATACAATGAAAGCAACATTGAAAGTTCATTTGCAA
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