CX291123

Overview
NameCX291123
Unique NameCX291123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length570
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 48/126 (38.10%), Postives = 66/126 (52.38%), Query Frame = 2
Query:  182 LFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKI 547
            LF+ I+V ++    RG K    +LPPGP P PV GN L++GD   H++L+  AK  G I  L+ GQ   VV SS  +AKE+L  Q   F +RT   + D     G     M +      WR +R+I
Sbjct:   13 LFAAIIVASIVSKLRGKKF---KLPPGPIPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRI 132          
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 2
Query:  179 LLFSWILVVALNYFSRGFKSGSR--RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFS 568
            LL S  L V L   S    +  R  RLPPGP P+PV+GNL ++     +   + A+ +GP++S+ FG   TVV S++ +AKE+L+  D    +R    +      +   + W      +  +RK+CN   F+
Sbjct:    5 LLLSVALAVVLIPLSLALLNRLRLGRLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFT 136          
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.527e-11
Identity = 48/136 (35.29%), Postives = 69/136 (50.74%), Query Frame = 2
Query:  152 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKI 547
            MD++     LL S++ V+     S+  +    +LPPGP P PV GN L++GD   H++L  LAK  G I  L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR +R+I
Sbjct:    1 MDLLLLEKTLLGSFVAVLVAILVSK-LRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRI 132          
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11
Identity = 48/126 (38.10%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  182 LFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKI 547
            LF+ I+   L    RG K    +LPPGP P P+ GN L++GD   H++L  LAK  G I+ L+ GQ   VV SS  +AKE+L  Q   F +RT   + D     G     M +      WR +R+I
Sbjct:   13 LFAAIIGAILISKLRGKKF---KLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRI 132          
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 41/104 (39.42%), Postives = 56/104 (53.85%), Query Frame = 2
Query:  248 RLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKI 547
            +LPPGP P P+ GN L++GD   H++L +LAK  G I  L+ GQ   VV SS  +AKE+L  Q   F +RT   + D     G     M +      WR +R+I
Sbjct:   32 KLPPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGEGQ---DMVFTVYGEHWRKMRRI 132          
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 36/103 (34.95%), Postives = 55/103 (53.40%), Query Frame = 2
Query:  251 LPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSH 559
            LPP P   PVIGNL +L   PH+SL  L+  +GP+M L FG+V  +V SS+ +A ++++  D    NR     I    +    + + P    WR ++ +C  H
Sbjct:   32 LPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVH 134          
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 33/107 (30.84%), Postives = 56/107 (52.34%), Query Frame = 2
Query:  248 RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFS 568
            +LPPGP P+PV+GNL ++     +  A+ A+ +GPI+S+ FG    V+ S++ +AKE+L+  D    +R    +          + W      +  +RK+C    FS
Sbjct:   27 KLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFS 133          
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 41/131 (31.30%), Postives = 67/131 (51.15%), Query Frame = 2
Query:  176 WLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFS 568
            +L F  +L + L  F +  K    +LPPGP   P+IGNL +  +   ++   L++ +GPI+ L++G V  VV SS   A+E+L+  D   C+R       A  ++   + + P    WR +RK+     FS
Sbjct:    4 FLCFLCLLPLIL-IFLKNLKPSKWKLPPGPKKLPIIGNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFS 133          
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11
Identity = 41/104 (39.42%), Postives = 55/104 (52.88%), Query Frame = 2
Query:  248 RLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKI 547
            +LPPGP P P+ GN L++GD   H++L  LAK  G I  L+ GQ   VV SS  +AKE+L  Q   F +RT   + D     G     M +      WR +R+I
Sbjct:   32 KLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRI 132          
BLAST of CX291123 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11
Identity = 41/104 (39.42%), Postives = 55/104 (52.88%), Query Frame = 2
Query:  248 RLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKI 547
            +LPPGP P P+ GN L++GD   H++L  LAK  G I  L+ GQ   VV SS  +AKE+L  Q   F +RT   + D     G     M +      WR +R+I
Sbjct:   32 KLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRI 132          
The following BLAST results are available for this feature:
BLAST of CX291123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
TCMO_CATRO1.935e-1138.10Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C98A1_SORBI1.935e-1131.82Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
TCMO_POPKI2.527e-1135.29Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_HELTU3.301e-1138.10Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_PHAAU4.311e-1139.42Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C71AF_ARATH4.311e-1134.95Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN5.630e-1130.84Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71BS_ARATH5.630e-1131.30Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN7.353e-1139.42Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_GLYEC7.353e-1139.42Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]

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Properties
Property NameValue
Genbank descriptionC03004D04SK OF2 Citrus clementina cDNA clone C03004D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291123 ID=CX291123; Name=CX291123; organism=Citrus clementina; type=EST; length=570bp
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAAGAGCTTCAAACAAAAGAGAGCGAGATTAAA
GATGGATATGGTAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTTTGG
TCGTCGCTTTAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGAAGG
CTTCCACCGGGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGAACT
CGGCGACAAACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATGGCC
CCATAATGAGTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCTTCT
GCAGCCATGGCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTGTAA
TCGAACGATCCCAGACGCAATCTACGCCCACGGCCATCATGAATTCGGGA
TGCCCTGGCTGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATATGC
AACTCACATGCTTTCTCTAG
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