CX291159

Overview
NameCX291159
Unique NameCX291159
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length611
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.502e-15
Identity = 57/201 (28.36%), Postives = 91/201 (45.27%), Query Frame = 3
Query:    3 NLNLIGPLPHVSIHSLSQKYGPLMHLKFGLSPVVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAPYGPYWRQARKICLMELLSAKRLDQFEYIRVEERNAFLSELFKSA--STPVHLKDRLYTLNLTWICRMVLGKRYTDEAEKNTVTPKDFTEMXXXXXXXXXXXXXXXSIPWLASFDLQGHVKRMKDV 599
            NL  +  L H  +H LS+K+GP++ L+ G   +VV SS E AE  LK HD+   +RP          +   +  APYG   R+ RK+  ++  S  ++  F YIR EE +  + +L ++A   + V L   L+ L  + I R   G+R+ +    N    +D                    + W   F + GH K++  V
Sbjct:   38 NLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFDEGNHVNAEKIEDLMFEVQKLGALSNSDLFPGGLGWFVDF-VSGHNKKLHKV 237          
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.962e-15
Identity = 55/162 (33.95%), Postives = 83/162 (51.23%), Query Frame = 3
Query:    3 NLNLIGPLPHVSIHSLSQKYGP--LMHLKFGLSPVVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAPYGPYWRQARKICLMELLSAKRLDQFEYIRVEERNAFLSEL----FKSASTPVHLKDRLYTLNLTWICRMVLGKRYTDEAEKNTV 470
            +L+ IGP  H+S+  L  KYG    + L+ G  P ++ SS   AE +++THD   ASRP  +A     YN   ++ +P G YW+Q RK+    LLS K++  F + R EE    +  L     KS ST V + + L       + R VLG  +  +  +NT+
Sbjct:   69 HLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKKG-RNTL 229          
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.562e-15
Identity = 59/214 (27.57%), Postives = 96/214 (44.86%), Query Frame = 3
Query:    9 NLIGPLPHVSIHSLSQKYGPLMHLKFGLSP-VVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAPYGPYWRQARKICLMELLSAKRLDQFEYIRVEERNAFLSELFKSASTP------VHLKDRLYTLNLTWICRMVLGKRYTDEAEKNTVTPKDFTEMXXXXXXXXXXXXXXXSIPWLASFDLQGHVKRM-------KDVSKK 608
            +L G  P+  I  L +KYGP++ LK G S   +V  +A  A  L + HD+SF+ RP +       Y   +M+ APYG YWR +R+IC +E+   KR+++   IR E  +  L    + AS+       + +   ++  +   +  M+  K    + E       +F                    P L  FD+QG  K+M       K+++KK
Sbjct:    6 DLAGSAPYKKIACLKEKYGPILWLKIGSSMNTMVIQTANSASELFRNHDVSFSDRPIVDVNLAHNYYKGSMALAPYGNYWRFSRRICTVEMFVHKRINETTNIRQESVDKMLRLDEEKASSSGGGGEGIEVTRYMFLASFNMVGNMIFSKDLVTDPESK--QGSEFFNAMIGIMEWAGVPNISDIFPCLKMFDVQGLRKKMERDMGKGKEITKK 217          
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.707e-15
Identity = 52/156 (33.33%), Postives = 80/156 (51.28%), Query Frame = 3
Query:    3 NLNLIGPLPHVSIHSLSQKYGP--LMHLKFGLSPVVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAPYGPYWRQARKICLMELLSAKRLDQFEYIRVEERNAFLSELFKSAS----TPVHLKDRLYTLNLTWICRMVLGKRYTDE 452
            +L+LIG   H+SI  L  K+G   L+ L+ G  P +  SS   A+ +L+T D  FASRP  +A +   Y  S ++  PYG Y RQ RK+    +LS K++  F + R EE    + ++  +A+      V L D L       + R VLG  + ++
Sbjct:   71 HLHLIGAETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIRAAATAAPPAAVDLSDLLSGYTNDVVSRAVLGASHRNQ 226          
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.661e-14
Identity = 51/160 (31.87%), Postives = 82/160 (51.25%), Query Frame = 3
Query:    3 NLNLIGPLP-HVSIHSLSQKYGPLMHLKFGLSPVVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAPYGPYWRQARKICLMELLSAKRLDQFEYIRVEERNAFLSELFKSA--STPVHLKDRLYTLNLTWICRMVLGKRYTDE-AEKNTV 470
            +L+LI  +P H S  ++S KYGPL+HL+F   P+V+ SSA  A  + K  D++ +SRP     +      S+    PYG Y +  +K  + +LL  + L +   IR +E   F   L   A     V +++    L    IC+M++G+  ++E  E  TV
Sbjct:   54 HLHLILFVPIHQSFKNISSKYGPLLHLRFFNFPIVLVSSASTAYEIFKAQDVNVSSRPPPPIEESLILGSSSFINTPYGDYSKFMKKFMVQKLLGPQALQRSRNIRADELERFYKTLLDKAMKKQTVEIRNEAMKLTNNTICKMIMGRSCSEENGEAETV 213          
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.406e-13
Identity = 45/153 (29.41%), Postives = 83/153 (54.25%), Query Frame = 3
Query:    3 NLNLIGPLPHVSIHSLSQKYGPLMHLKFGLSPVVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAPYGPYWRQARKICLMELLSAKRLDQFEYIRVEERNAFLSELFKSAST------PVHLKDRLYTLNLTWICRMVLGKRY 443
            NL  I P+        +++YGP++ + FG    VV S++E+A+ +LK +D   A RP   + +  + N   +  A YGP++ + RK+C +EL + KRL+    IR +E  A +  ++++A+       P+ +++ L  +    I R+  GKR+
Sbjct:   43 NLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRF 195          
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.090e-13
Identity = 48/153 (31.37%), Postives = 78/153 (50.98%), Query Frame = 3
Query:    3 NLNLIGPLPHVSIHSLSQKYGPLMHLKFGLSPVVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAPYGPYWRQARKICLMELLSAKRLDQFEYIRVEERNAFLSELFKSASTP------VHLKDRLYTLNLTWICRMVLGKRY 443
            NL  I P+     +  +Q YGP++ +  G    VV SSAE+A+ +LK HD   A R    + +  + N   +  A YGP++ + RK+C +EL + KRL+    IR +E  A +  +F+  + P      + L+  L  +    I R+  GKR+
Sbjct:   39 NLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRF 191          
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 53/197 (26.90%), Postives = 92/197 (46.70%), Query Frame = 3
Query:    3 NLNLIGPLPHVSIHSLSQKYGPLMHLKFGLSPVVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAPYGPYWRQARKICLMELLSAKRLDQFEYIRVEERNAFLSELFKSA--STPVHLKDRLYTLNLTWICRMVLGKRYTDEAEKNTVTPKDFTEMXXXXXXXXXXXXXXXSIPWLASFDLQGHVKR 587
            NL+L+G LPH S+  L++ +GP+M L+ G    +V SSA  AE +LK  D++F++R    A +   +   ++S       WR  R+I    + S   L+  +++R ++    ++   K+A  +  VH+    +  +L  +   +  K  TD  E    + K+F E+                 P L   D QG +KR
Sbjct:   40 NLHLLGALPHQSLAKLAKIHGPIMSLQLGQITTLVISSATAAEEVLKKQDLAFSTRNVPDAVRAYNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEELIAYCRKAALSNENVHIGRAAFRTSLNLLSNTIFSKDLTDPYED---SGKEFREVITNIMVDSAKTNLVDVFPVLKKIDPQG-IKR 232          
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.931e-11
Identity = 48/190 (25.26%), Postives = 85/190 (44.74%), Query Frame = 3
Query:    3 NLNLIGPLPHVSIHSLSQKYGPLMHLKFGLSPVVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAPYGPYWRQARKICLMELLSAKRLDQFEYIRVEERNAFLSELFKSASTP------VHLKDRLYTLNLTWICRMVLGKRYTDEAEKNTVTPKDFTEMXXXXXXXXXXXXXXXSIPWL 554
            NL  I P+        +Q YGP++ + FG +  V+ S++E+A+ +LK HD   A R    +    + +   +  A YGP++ + RK+C +EL S KRL+    IR +E  + +  ++   ++       + L+  L  +    I R+  GKR+ +          +F  +                IPWL
Sbjct:   40 NLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVENGLKLGASLAMAEHIPWL 229          
BLAST of CX291159 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 61/210 (29.05%), Postives = 101/210 (48.10%), Query Frame = 3
Query:    3 NLNLIGPLPHVSIHSLSQKYGPLMHLKFGLSPVVVGSSAEVAELLLKTHDISFASRPALLAGKYTTYNYSAMSTAP-YGPYWRQARKICLMELLSAKRLDQFEYIR---VEERNAFLSELF-KSASTPVHLKDRLYTLNL--TWICRMVLGKRYTDEAEKNTVTPKDFTEMXXXXXXXXXXXXXXXSIPWLASFDLQGHVKRMKDVSKKL 611
            N++L+G  PH S   LS+ YGP+M LK G    VV +S E A  +L+THD   ++R    A +   +  +++   P     WR  R++ + +LLS +R++  + +R   V+E  +F+SE   +  S  +     + TLN+    +  + LG  Y  +A  N V     + M                 P+L   DLQG+VK  K  +++L
Sbjct:   50 NIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFITTLNIISNILFSVDLGS-YNAKASINGVQDTVISVMDAAGTPDAANY-----FPFLRFLDLQGNVKTFKVCTERL 253          
The following BLAST results are available for this feature:
BLAST of CX291159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
C71BO_ARATH1.502e-1528.36Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71C3_MAIZE1.962e-1533.95Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C76A1_SOLME2.562e-1527.57Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C71C2_MAIZE5.707e-1533.33Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
THAD_ARATH1.661e-1431.88Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI1.406e-1329.41Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C98A3_ARATH4.090e-1331.37Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU2.244e-1126.907-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C98A2_SOYBN2.931e-1125.26Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C76C1_ARATH3.828e-1129.05Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC03004G05SK OF2 Citrus clementina cDNA clone C03004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291159 ID=CX291159; Name=CX291159; organism=Citrus clementina; type=EST; length=611bp
GAAACCTGAACCTCATCGGCCCTCTCCCTCACGTCTCCATCCACTCTCTC
TCCCAAAAATACGGCCCCCTTATGCACCTAAAATTCGGCCTCTCCCCGGT
TGTTGTAGGCTCATCAGCTGAAGTAGCAGAGCTTCTGCTCAAGACTCATG
ACATTAGCTTTGCTTCAAGGCCAGCTCTTCTTGCTGGGAAGTACACAACT
TACAATTACTCAGCAATGTCAACCGCACCCTATGGCCCATATTGGCGCCA
GGCTCGCAAAATCTGCCTAATGGAACTTCTCAGTGCAAAACGCTTGGATC
AGTTTGAGTACATAAGGGTAGAAGAAAGAAATGCTTTCCTCTCGGAGTTG
TTCAAATCAGCTTCCACACCTGTTCATCTGAAAGATCGTCTCTACACACT
CAATCTCACTTGGATTTGTCGGATGGTGTTGGGGAAAAGGTATACGGACG
AAGCTGAAAAAAATACTGTGACTCCAAAAGACTTCACGGAAATGATTGAA
GAATTGTTCTTGCTTATTGGTATTTTGGATATTGGGGACTCAATTCCATG
GCTTGCTTCTTTTGATTTACAAGGGCATGTTAAGAGAATGAAGGATGTGA
GCAAGAAGCTT
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