CX291190

Overview
NameCX291190
Unique NameCX291190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length461
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.377e-19
Identity = 49/130 (37.69%), Postives = 66/130 (50.77%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQMD-RCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEAVN 453
            LY LGAR+ ++ G G MGC P+ LAQ+  +  C   +      FN  +  +I ++NA +    F   +  +M  D L+N   +GF      CCG G   G   C P    C NR+ Y FWDAFHPTE  N
Sbjct:  206 LYELGARRVLVTGTGAMGCAPAELAQHSRNGECYGALQTAAALFNPQLVDLIASVNAEIGQDVFVAANAYQMNMDYLSNPEQFGFVTSKVACCGQGPYNGIGLCTPVSNLCPNRDLYAFWDAFHPTEKAN 335          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.377e-19
Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQMD--RCSEEVNQLVMPFNA----NVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCG---------IGRNGGQITCLPFQTPCANREQYVFWDAFHPTEAVNIM 459
            L+ LG RKFV+ G+G +GCIP   A N +   +CSE+VNQ+V  +N     ++KT+ N L +      F + +   +F  L+ NY+ +G    D+ CCG          G N         Q  C +R ++VFWDA+HPTEA N++
Sbjct:  205 LHQLGGRKFVVVGVGPLGCIPFARALNLIPAGKCSEQVNQVVRGYNMKLIHSLKTLNNELRSEDYNTTFVYANSYDLFLKLVLNYQLFGLKNADKPCCGGYFPPFACFKGPNQNSS-----QAACEDRSKFVFWDAYHPTEAANLI 345          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.643e-18
Identity = 46/129 (35.66%), Postives = 64/129 (49.61%), Query Frame = 1
Query:   64 TLYNLGARKFVLAGLGRMGCIPSILAQNQM--DRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTE 444
            +LY LGAR+ ++ G G +GC+P+ LA +      C+ E  Q    FN  +  M+  LN  +    F   +      D + N + +GF      CCG G   GQ  C P  T C++R  Y FWD FHPTE
Sbjct:  206 SLYELGARRVMVTGTGPLGCVPAELASSGSVNGECAPEAQQAAAIFNPLLVQMLQGLNREIGSDVFIGANAFNTNADFINNPQRFGFVTSKVACCGQGAYNGQGVCTPLSTLCSDRNAYAFWDPFHPTE 334          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.803e-18
Identity = 50/132 (37.88%), Postives = 66/132 (50.00%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQ--NQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQT-PCANREQYVFWDAFHPTEAVN 453
            LY+LGAR+  +  L  +GC+P+ +         CSE++N   + FN  + T   +L  NL G      DI +   DL T    +GF+   R CCG G     I C P     C N  +YVFWD FHPTEA N
Sbjct:  198 LYSLGARRIGVTTLPPLGCLPAAITVVGPHEGGCSEKLNNDAISFNNKLNTTSQDLKRNLIGLNLVVFDIYQPLYDLATRPSEFGFAEARRACCGTGLLETSILCNPKSVGTCNNATEYVFWDGFHPTEAAN 329          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL43_ARATH (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.803e-18
Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILA---QNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEA 447
            LY+LG R  ++ GL  MGC+P  +    +N    C E  N+  + +N  ++ ++  + A+LPG++F + D+     +++ N   YGF    RGCCG G       C  F   C NR +++F+D+ HP+EA
Sbjct:  212 LYSLGVRNVLVGGLPPMGCLPIHMTAKFRNIFRFCLEHHNKDSVLYNEKLQNLLPQIEASLPGSKFLYADVYNPMMEMIQNPSKYGFKETKRGCCGTGFLETSFMCNVFSPVCQNRSEFLFFDSIHPSEA 341          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL87_ARATH (GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana GN=At5g55050 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.661e-18
Identity = 44/135 (32.59%), Postives = 74/135 (54.81%), Query Frame = 1
Query:   52 ENL*TLYNLGARKFVLAGLGRMGCIPSILAQNQ-MDRCSEEVNQLVMPFNANVKTMINNLNANLPGA-RFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAF-HPTEA 447
            E L  +++ GAR+F++ G+ ++GC P   A+N  +  C E  N     +N  +  M+  L   L G+  +T+ D  +   D+++N   YGF+ +   CCG G     + CLP    C++R +++FWD + HPTEA
Sbjct:  214 EQLKRIHDSGARRFLIIGVAQIGCTPGKRAKNSTLHECDEGANMWCSLYNEALVKMLQQLKQELQGSITYTYFDNYKSLHDIISNPARYGFADVTSACCGNGELNADLPCLPLAKLCSDRTKHLFWDRYGHPTEA 348          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 3.661e-18
Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILA---QNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEA 447
            LY+LG R  ++ GL  MGC+P  +    +N    C E  N+  + +N  ++ ++  + A+LPG++F + D+     +++ N   YGF    RGCCG G       C  F   C NR +++F+D+ HP+EA
Sbjct:  212 LYSLGVRNVLVGGLPPMGCLPIHMTAKFRNIFRFCLEHHNKDSVLYNEKLQKLLPQIEASLPGSKFLYADVYNPMMEMIQNPSKYGFKETKRGCCGTGFLETSFMCNVFSPVCQNRSEFMFFDSIHPSEA 341          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.661e-18
Identity = 43/130 (33.08%), Postives = 68/130 (52.31%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILA---QNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEA 447
            LY+LG R  V+ GL  MGC+P  +    +N +  C E+ N+  + +N  +   +  + A+LPG+ F + ++     D++ N   YGF    +GCCG G       C P    C N   ++FWD+ HP+EA
Sbjct:  211 LYSLGCRNIVVGGLPPMGCLPIQMTAKMRNILRFCVEQENKDSVLYNQKLVKKLPEIQASLPGSNFLYANVYDPLMDMIQNPSKYGFKETKKGCCGTGYLETTFMCNPLTKTCPNHSDHLFWDSIHPSEA 340          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.782e-18
Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 1
Query:   64 TLYNLGARKFVLAGLGRMGCIPSILAQNQMDR-CSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEAVNIM 459
            +LY LGARK  + G+ ++GC P ++A +     C+ EVN+ V PFN N+K ++   N +   A+FTF+DI          +   GF V D+ CC +    G+  C   +  C  + +YV+WD  H TEA N++
Sbjct:  199 SLYVLGARKVAVFGVSKLGCTPRMIASHGGGNGCAAEVNKAVEPFNKNLKALVYEFNRDFADAKFTFVDIFSGQSPFA--FFMLGFRVTDKSCCTV--KPGEELCATNEPVCPVQRRYVYWDNVHSTEAANMV 327          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL5_ARATH (GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.065e-17
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 1
Query:   64 TLYNLGARKFVLAGLGRMGCIPSI--LAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQ-TPCANREQYVFWDAFHPTE 444
            +LY +GARKF + G   +GC+P       N  + C   +NQ+   FN  +   +NNL+  LPGA+F ++D+     +L+ N R+ GF  +  GCC          C+P    PC +  QYVFWD  HP+E
Sbjct:  207 SLYAMGARKFAVLGTLPLGCLPGARHTGGNFGNICLVPINQVAAIFNQKLSAKLNNLHTILPGAKFVYVDMYNPLLNLINNPRASGFIDVADGCC----------CMPTSPVPCPDASQYVFWDFAHPSE 326          
The following BLAST results are available for this feature:
BLAST of CX291190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
LTL1_ARATH7.377e-1937.69GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL81_ARATH7.377e-1936.30GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
GDL67_ARATH1.643e-1835.66GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]
GDL78_ARATH2.803e-1837.88GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]
GDL43_ARATH2.803e-1833.08GDSL esterase/lipase At2g31540 OS=Arabidopsis thal... [more]
GDL87_ARATH3.661e-1832.59GDSL esterase/lipase At5g55050 OS=Arabidopsis thal... [more]
GDL44_ARATH3.661e-1833.08GDSL esterase/lipase At2g31550 OS=Arabidopsis thal... [more]
GDL42_ARATH3.661e-1833.08GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
GDL36_ARATH4.782e-1835.34GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
GDL5_ARATH1.065e-1736.15GDSL esterase/lipase At1g23500 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC03005B04SK OF2 Citrus clementina cDNA clone C03005B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291190 ID=CX291190; Name=CX291190; organism=Citrus clementina; type=EST; length=461bp
TTTTTTTTTAGCTTGTTAACATATTTATATAACTTGTATTAAGTATTGAT
TGAAAATCTATAGACCCTTTACAATTTGGGAGCAAGGAAATTTGTGTTGG
CCGGGTTAGGAAGAATGGGATGTATTCCAAGCATTTTGGCTCAAAATCAA
ATGGATCGCTGTTCAGAAGAAGTGAATCAACTTGTTATGCCTTTTAATGC
AAATGTGAAGACTATGATTAACAATCTTAATGCCAATCTTCCTGGTGCAA
GATTCACCTTCATTGACATTGCCCGCATGTTTGAAGATCTCCTCACCAAT
TATAGATCATACGGATTCAGTGTAATAGATCGAGGGTGCTGTGGCATTGG
ACGAAACGGAGGCCAAATTACATGTCTTCCATTCCAAACACCATGTGCAA
ATCGAGAACAATACGTTTTCTGGGATGCATTTCACCCAACAGAAGCTGTG
AACATTATGTT
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