CX291190

Overview
NameCX291190
Unique NameCX291190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length461
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.065e-17
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIP--SILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQT-PCANREQYVFWDAFHPTE 444
            LY  GA+K    G+  +GCIP           +C++E+N     FN+ + T +N L   +      +IDI   F D++ N + YGF  IDRGCCG G       C  + +  C N   ++FWD++HPTE
Sbjct:  253 LYESGAKKIGFIGVSPIGCIPIQRTTRGGLKRKCADELNFAAQLFNSKLSTSLNELAKTMKNTTLVYIDIYSSFNDMIQNPKKYGFDEIDRGCCGTGLLELGPLCNKYTSLLCKNVSSFMFWDSYHPTE 381          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL39_ARATH (GDSL esterase/lipase At2g24560 OS=Arabidopsis thaliana GN=At2g24560 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.065e-17
Identity = 41/130 (31.54%), Postives = 71/130 (54.62%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILA---QNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEA 447
            LY+LG RK ++ GL  MGC+P  +    +N +  C E+ N+  + +N  ++ ++  + A+L G++  + ++     D++ N   YGF    RGCCG G       C  F   C N  +++F+D+ HP+EA
Sbjct:  211 LYSLGCRKIMVGGLPPMGCLPIQMTAKFRNALRFCLEQENRDSVLYNQKLQNLLPQIEASLTGSKILYSNVYDPMMDMMQNPSKYGFKETKRGCCGTGHLETSFMCNAFSPTCRNHSEFLFFDSIHPSEA 340          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.065e-17
Identity = 49/134 (36.57%), Postives = 67/134 (50.00%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQN--QMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCL---PFQTPCANREQYVFWDAFHPTEAVN 453
            L+ LGARK  L GL  MGC+P   A N      C    N + + FN+ +  M+  L+  LPG+   F +    F  ++ N  S+GF V+   CC  G       C    PF   C N ++YVFWD+FHPT+  N
Sbjct:  203 LHGLGARKISLGGLPPMGCMPLERATNIGTGGECVGRYNDIAVQFNSKLDKMVEKLSKELPGSNLVFSNPYEPFMRIIKNPSSFGFEVVGAACCATGMFEMGYGCQRNNPF--TCTNADKYVFWDSFHPTQKTN 334          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: EXL2_ARATH (GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.065e-17
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPS--ILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTP-CANREQYVFWDAFHPTE 444
            L+  GAR+  + G   +GC+PS   LA      C    N     +N  +   + +L+  L      ++DI     D++ + R YGF V+D+GCCG G     + C  F    C NR++YVFWD+FHPTE
Sbjct:  236 LHEYGARRIQVFGAPPVGCVPSQRTLAGGPTRNCVVRFNDATKLYNVKLAANLGSLSRTLGDKTIIYVDIYDSLLDIILDPRQYGFKVVDKGCCGTGLIEVALLCNNFAADVCPNRDEYVFWDSFHPTE 364          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL23_ARATH (GDSL esterase/lipase At1g58430 OS=Arabidopsis thaliana GN=At1g58430 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.817e-17
Identity = 42/130 (32.31%), Postives = 72/130 (55.38%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILA---QNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEA 447
            LY+LG RK ++ GL  MGC+P  +    +N +  C E+ N+  + +N  ++ ++    A+L G++  + D+     ++L N   YGF    RGCCG G       C  + + C NR +++F+D+ HP+EA
Sbjct:  212 LYSLGCRKILVGGLPPMGCLPIQMTAQFRNVLRFCLEQENRDSVLYNQKLQKLLPQTQASLTGSKILYSDVYDPMMEMLQNPSKYGFKETTRGCCGTGFLETSFMCNAYSSMCQNRSEFLFFDSIHPSEA 341          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.048e-17
Identity = 49/135 (36.30%), Postives = 64/135 (47.41%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQ-----NQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQT-PCANREQYVFWDAFHPTEAVN 453
            LY LGAR+  +  L  +GC+P+ +       N M  C E +NQ  + FN  +     NL  NLPG +    DI     +++ N   YGF    R CCG G       C       C+N   YVFWD FHP+EA N
Sbjct:  205 LYGLGARRIGVTTLPPLGCLPAAITLFGGVGNNM--CVERLNQDAVSFNTKLNNTSINLTNNLPGLKLVVFDIYNPLLNMVINPVEYGFFESRRACCGTGTMETSFLCNALSVGTCSNATNYVFWDGFHPSEAAN 337          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL41_ARATH (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana GN=At2g30220 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.048e-17
Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILA---QNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEA 447
            LY+LG R  ++ GL  MGC+P  L    +  +  C E+ N+  + +N  +   +  + A+LPG++F + ++     D++ N   YGF    +GCCG G       C      C N   ++FWD+ HP+EA
Sbjct:  210 LYSLGCRNILVGGLPPMGCLPIQLTAKLRTILGICVEQENKDSILYNQKLVKKLPEIQASLPGSKFLYANVYDPVMDMIRNPSKYGFKETKKGCCGTGYLETSFLCTSLSKTCPNHSDHLFWDSIHPSEA 339          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.178e-16
Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQMD--RCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGR-NGGQITCLPFQTPCANREQYVFWDAFHPTEAVN 453
            +Y LGARK    G+  MGC+P     N  D   C+   N L + FN  ++ ++  LN  L G +  F +   +  D++T    YG  +    CCG G    G +        C++  ++VFWDAFHPTE  N
Sbjct:  203 IYRLGARKMSFTGISPMGCLPLERVTNLDDPFSCARSYNDLAVDFNGRLRRLVTKLNRELTGIKIYFANPYDIMWDIVTKPNLYGLEISSSACCGTGLFEMGFLCGQDNPLTCSDANKFVFWDAFHPTERTN 334          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.538e-16
Identity = 45/135 (33.33%), Postives = 68/135 (50.37%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIP---SILAQNQMDR-CSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEAVNIM 459
            LY++G RK ++ GL  +GC+P   ++  Q Q +R C ++ N     FN  +K  +  + +NL G+   + DI     D+ TN + YG     RGCCG G       C      C N  QY+FWD  HP++   I+
Sbjct:  212 LYDIGCRKIMVLGLPPVGCLPIQMTMAMQKQNERRCIDKQNSDSQEFNQKLKNSLTEMQSNLTGSVIFYGDIYGALFDMATNPQRYGLKETTRGCCGTGEIELAYLCNALTRICPNPNQYLFWDDIHPSQIAYIV 346          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.624e-16
Identity = 47/130 (36.15%), Postives = 63/130 (48.46%), Query Frame = 1
Query:   64 TLYNLGARKFVLAGLGRMGCIPS--ILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPF-QTPCANREQYVFWDAFHPTE 444
            TLY  GAR+ ++ G   +GC+PS   +A      C    N     FN  +   I+ L+  L      +IDI     DL+ N   YGF V ++GCCG G       C  +  + C  R  YVFWD+FHPTE
Sbjct:  227 TLYGYGARRILVFGAPPIGCVPSQRTVAGGPTRDCVARFNDAAKLFNTKLSANIDVLSRTLQDPTIIYIDIYSPLLDLILNPHQYGFKVANKGCCGTGLIEVTALCNNYTASVCPIRSDYVFWDSFHPTE 356          
The following BLAST results are available for this feature:
BLAST of CX291190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
GDL4_ARATH1.065e-1734.88GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL39_ARATH1.065e-1731.54GDSL esterase/lipase At2g24560 OS=Arabidopsis thal... [more]
GDL34_ARATH1.065e-1736.57GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
EXL2_ARATH1.065e-1734.88GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana ... [more]
GDL23_ARATH1.817e-1732.31GDSL esterase/lipase At1g58430 OS=Arabidopsis thal... [more]
GDL72_ARATH4.048e-1736.30GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL41_ARATH4.048e-1731.54GDSL esterase/lipase At2g30220 OS=Arabidopsis thal... [more]
GDL48_ARATH1.178e-1633.33GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL1_ARATH1.538e-1633.33GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]
EXL1_ARATH2.624e-1636.15GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03005B04SK OF2 Citrus clementina cDNA clone C03005B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291190 ID=CX291190; Name=CX291190; organism=Citrus clementina; type=EST; length=461bp
TTTTTTTTTAGCTTGTTAACATATTTATATAACTTGTATTAAGTATTGAT
TGAAAATCTATAGACCCTTTACAATTTGGGAGCAAGGAAATTTGTGTTGG
CCGGGTTAGGAAGAATGGGATGTATTCCAAGCATTTTGGCTCAAAATCAA
ATGGATCGCTGTTCAGAAGAAGTGAATCAACTTGTTATGCCTTTTAATGC
AAATGTGAAGACTATGATTAACAATCTTAATGCCAATCTTCCTGGTGCAA
GATTCACCTTCATTGACATTGCCCGCATGTTTGAAGATCTCCTCACCAAT
TATAGATCATACGGATTCAGTGTAATAGATCGAGGGTGCTGTGGCATTGG
ACGAAACGGAGGCCAAATTACATGTCTTCCATTCCAAACACCATGTGCAA
ATCGAGAACAATACGTTTTCTGGGATGCATTTCACCCAACAGAAGCTGTG
AACATTATGTT
back to top