CX291190

Overview
NameCX291190
Unique NameCX291190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length461
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL85_ARATH (GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 3.427e-16
Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTE 444
            L+ LGA++ V+ G+  MGC+P I        C +++NQ+   FNA +   +  L + + G +  ++D     ++ + N R +GF     GCCG G      TC   Q  C +  +YVFWDA HPT+
Sbjct:  214 LHRLGAKRLVVVGVPPMGCMPLIKYLRGQKTCVDQLNQIAFSFNAKIIKNLELLQSKI-GLKTIYVDAYSTIQEAIKNPRKFGFVEASLGCCGTGTYEYGETCKDMQV-CKDPTKYVFWDAVHPTQ 337          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 3.427e-16
Identity = 47/134 (35.07%), Postives = 62/134 (46.27%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILA----QNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQT-PCANREQYVFWDAFHPTEAVN 453
            LY+LGARK  +  L  +GC+P+ +         + C E +NQ  + FN  +     NL  NLPG +    DI     ++  N    GF    R CCG G       C       C+N   YVFWD FHP+EA N
Sbjct:  205 LYDLGARKIGVTTLPPLGCLPAAITLFGETGNNNTCVERLNQDAVSFNTKLNNTSMNLTNNLPGLKLVVFDIYNPLLNMAMNPVENGFFESRRACCGTGTVETSFLCNARSVGTCSNATNYVFWDGFHPSEAAN 338          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 7.634e-16
Identity = 51/135 (37.78%), Postives = 66/135 (48.89%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSIL----AQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITC--LPFQTPCANREQYVFWDAFHPTEAVN 453
            LY LGAR+  +  L  MGC+P+ +    A N+   C E +N   + FN  ++     L     G R    ++ + F D++TN    GF    R CCG G       C  L F T C N   YVFWD FHPTEAVN
Sbjct:  204 LYELGARRIGVISLPPMGCLPAAITLFGAGNKS--CVERLNNDAIMFNTKLENTTRLLMNRHSGLRLVAFNVYQPFLDIITNPTDNGFFETKRACCGTGTIETSFLCNSLSFGT-CVNATGYVFWDGFHPTEAVN 335          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 9.970e-16
Identity = 48/128 (37.50%), Postives = 65/128 (50.78%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQMDR-CSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLP-FQTPCANREQYVFWDAFHPTE 444
            LYNLGARKF + G   +GC+P   A N +   C E  N +   FN  +   +NNLN+ LPG+R  ++D+     +L+ N    GF    R CC          C P    PC +  +YVFWD  HP+E
Sbjct:  204 LYNLGARKFAIMGTLPLGCLPG--ASNALGGLCLEPANAVARLFNRKLADEVNNLNSMLPGSRSIYVDMYNPLLELVKNPLRSGFISPTRPCC----------CAPAAPIPCLDASRYVFWDIAHPSE 319          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL30_ARATH (GDSL esterase/lipase At1g73610 OS=Arabidopsis thaliana GN=At1g73610 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 9.970e-16
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 1
Query:   64 TLYNLGARKFVLAGLGRMGCIPSILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQ-TPCANREQYVFWDAFHPTE 444
            +LY++GARKF + G   +GC+P   A  +   C   VNQ    FN  +   I+NL A  PGA+F ++D+      L+ N ++ GF  +   CC          C P    PC +  +YVFWD  HPT+
Sbjct:  210 SLYDMGARKFAVMGTLPLGCLPGARALTRA--CELFVNQGAAMFNQQLSADIDNLGATFPGAKFVYVDMYNPLLGLIINPQASGFIDVADACC----------CTPTHLIPCLDASRYVFWDVAHPTQ 325          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 9.970e-16
Identity = 41/129 (31.78%), Postives = 68/129 (52.71%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPS--ILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPF-QTPCANREQYVFWDAFHPTE 444
            LY  G R+  + G   +GC+PS   L    +  C++  N+    FN+ +   +++L   LPG +  +I+I     D++ N  +YGF V ++GCCG G     + C     + C +   +VFWD++HPTE
Sbjct:  217 LYGYGVRRVAVFGAPPIGCVPSQRTLGGGILRDCADNYNEAAKLFNSKLSPKLDSLRKTLPGIKPIYINIYDPLFDIIQNPANYGFEVSNKGCCGTGAIEVAVLCNKITSSVCPDVSTHVFWDSYHPTE 345          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.701e-15
Identity = 45/135 (33.33%), Postives = 70/135 (51.85%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQM---DRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITC---LPFQTPCANREQYVFWDAFHPTEAVN 453
            +Y LGARK  L+GL   GC+P +    Q+    +C EE N +   FN  ++  +  LN +L G +  F +   +  +++ +  ++GF  +   CCG G       C    PF   C++  +YVFWD+FHPTE  N
Sbjct:  204 IYRLGARKMSLSGLSPFGCLP-LERTTQLFYGSKCIEEYNIVARDFNIKMEEKVFQLNRDLNGIQLVFSNPYDLVSEIIYHPEAFGFENVRSACCGTGYYEMSYLCDKMNPF--TCSDASKYVFWDSFHPTEKTN 335          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.456e-14
Identity = 40/129 (31.01%), Postives = 65/129 (50.39%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPS--ILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITC-LPFQTPCANREQYVFWDAFHPTE 444
            +Y LGAR+     LG +GC+P+  +L     ++C  ++N +   +N  ++ ++N +    PGA   F  +  +     T    YGFS +   CCG G  GG + C       C N  +++FWD +HPTE
Sbjct:  201 IYKLGARRIAFFSLGPVGCVPARAMLPNAPTNKCFGKMNVMAKMYNKRLEDIVNIIPTKYPGAIAVFGAVYGITHRFQTYPARYGFSDVSNACCGNGTLGGLMQCGREGYKICNNPNEFLFWDFYHPTE 329          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.456e-14
Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIP---SILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITC---LPFQTPCANREQYVFWDAFHPTE 444
            L+ LGARK  +     +GC+P   ++        C++ +N +   FNA +   +++L+  L G    +I++     D++ + + YGF V DRGCCG G       C    PF   C+N   Y+FWD++HP+E
Sbjct:  202 LHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKELDGV-ILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLAISYLCNSLNPF--TCSNSSAYIFWDSYHPSE 330          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.456e-14
Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIP---SILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITC---LPFQTPCANREQYVFWDAFHPTE 444
            L+ LGARK  +     +GC+P   ++        C++ +N +   FNA +   +++L+  L G    +I++     D++ + + YGF V DRGCCG G       C    PF   C+N   Y+FWD++HP+E
Sbjct:  202 LHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKELDGV-ILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLAISYLCNSLNPF--TCSNSSAYIFWDSYHPSE 330          
The following BLAST results are available for this feature:
BLAST of CX291190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
GDL85_ARATH3.427e-1633.33GDSL esterase/lipase At5g45950 OS=Arabidopsis thal... [more]
GDL73_ARATH3.427e-1635.07GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
GDL59_ARATH7.634e-1637.78GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL89_ARATH9.970e-1637.50GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
GDL30_ARATH9.970e-1635.16GDSL esterase/lipase At1g73610 OS=Arabidopsis thal... [more]
EXL3_ARATH9.970e-1631.78GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
GDL66_ARATH1.701e-1533.33GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GLIP6_ARATH2.456e-1431.01GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]
GDL26_ARATH2.456e-1431.82GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH2.456e-1431.82GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03005B04SK OF2 Citrus clementina cDNA clone C03005B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291190 ID=CX291190; Name=CX291190; organism=Citrus clementina; type=EST; length=461bp
TTTTTTTTTAGCTTGTTAACATATTTATATAACTTGTATTAAGTATTGAT
TGAAAATCTATAGACCCTTTACAATTTGGGAGCAAGGAAATTTGTGTTGG
CCGGGTTAGGAAGAATGGGATGTATTCCAAGCATTTTGGCTCAAAATCAA
ATGGATCGCTGTTCAGAAGAAGTGAATCAACTTGTTATGCCTTTTAATGC
AAATGTGAAGACTATGATTAACAATCTTAATGCCAATCTTCCTGGTGCAA
GATTCACCTTCATTGACATTGCCCGCATGTTTGAAGATCTCCTCACCAAT
TATAGATCATACGGATTCAGTGTAATAGATCGAGGGTGCTGTGGCATTGG
ACGAAACGGAGGCCAAATTACATGTCTTCCATTCCAAACACCATGTGCAA
ATCGAGAACAATACGTTTTCTGGGATGCATTTCACCCAACAGAAGCTGTG
AACATTATGTT
back to top