CX291190

Overview
NameCX291190
Unique NameCX291190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length461
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL52_ARATH (GDSL esterase/lipase At3g14820 OS=Arabidopsis thaliana GN=At3g14820 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.207e-14
Identity = 44/130 (33.85%), Postives = 72/130 (55.38%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPS--ILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTP--CANREQYVFWDAFHPTE 444
            L  LGA+   L     +GC+P+   L      +C E++N + + FN+ + + ++ L   LP +R  FID+     D++ N  +YGF V D+GCCG G+      C  F TP  C++   +VF+D++HP+E
Sbjct:  204 LSELGAKNIGLFSGVPVGCLPAQRTLFGGFERKCYEKLNNMALHFNSKLSSSLDTLKKELP-SRLIFIDVYDTLLDIIKNPTNYGFKVADKGCCGTGKIELMELCNKF-TPFTCSDASTHVFFDSYHPSE 331          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 4.189e-14
Identity = 39/127 (30.71%), Postives = 62/127 (48.82%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTP-CANREQYVFWDAFHPTE 444
            LY  GAR+  + G   +GC+PS   + +   C+EE+N     FN+ +  ++  L+  LP + F ++DI  +   +L    +YGF    + CC  G       C    +  C N   Y+FWD  HPT+
Sbjct:  389 LYGYGARRIGVIGTPPLGCVPSQRLKKKKI-CNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGALCKKSTSKICPNTSSYLFWDGVHPTQ 514          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.219e-13
Identity = 39/127 (30.71%), Postives = 63/127 (49.61%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTP-CANREQYVFWDAFHPTE 444
            LY  GAR+  + G   +GC PS   + +   C+E++N     FN+ +  ++  L+  LP +   + DI  +F  +L +   YGF  I + CC IG   G + C        +N   Y+FWD  HP++
Sbjct:  306 LYGYGARRIGVIGTPPIGCTPSQRVKKKKI-CNEDLNYAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFCKERTLKNMSNASSYLFWDGLHPSQ 431          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: EXL4_ARATH (GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana GN=EXL4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.592e-13
Identity = 43/130 (33.08%), Postives = 69/130 (53.08%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPS--ILAQNQMDRCSEEVNQLVMPFNANVKTMINNLN--ANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTE 444
            LY+ GARKF + G+  +GC+P   I     +  C+   N++   +N  +++   +    A   GA+F ++D+     D++ NYR YGFS    GCC +      IT +    PC N ++YVF+D  HP+E
Sbjct:  204 LYDQGARKFAVMGVIPLGCLPMTRIFLGGFVITCNFFANRVAEQYNGKLRSGTKSWGREAGFRGAKFVYVDMYNTLMDVIKNYRRYGFSNEKNGCCCM------ITAI---IPCPNPDKYVFYDFVHPSE 324          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.546e-13
Identity = 38/134 (28.36%), Postives = 65/134 (48.51%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQMDR--------CSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTE 444
            LY  GAR+  +AGL  +GC+P  +    ++         C+E  N     +N  ++ +I  L+    G++  ++DI     D++ + R YG     RGCCG G       C P    C +  +Y+F+D+ HP++
Sbjct:  210 LYEAGARRITIAGLPPIGCLPVQVTLTSINTPRIFHHRICTEHQNDDSRVYNQKLQKLIFGLSQRFRGSKVLYLDIYSPLIDMIKHPRKYGLEETLRGCCGTGLLEAGPLCQPLSRTCDDVSKYLFFDSVHPSQ 343          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 6.049e-13
Identity = 46/137 (33.58%), Postives = 59/137 (43.07%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQN--QMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTP------CANREQYVFWDAFHPTEAVN 453
            LY LGARKF    LG  GC PS L  N  ++  C E V +L+   N     ++  L   L G ++   D        + N   YGF   +  CCG G   G  TC     P      C N + YVF+D  H TE  +
Sbjct:  215 LYKLGARKFGFLSLGPFGCTPSALIINSTKIGSCFEPVTELINLHNQEFPKVLRRLERRLSGFKYALHDFHTSLSQRINNPSRYGFKEGEMACCGSGPLRGINTCGFRNGPSQGYKLCENADDYVFFDPSHLTETAH 351          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 7.900e-13
Identity = 44/149 (29.53%), Postives = 68/149 (45.64%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILA-----QNQMDR--CSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIG----RNGGQITC---------LPFQTPCANREQYVFWDAFHPTEAVN 453
            LY  GAR + +   G +GC+  +++     ++++D   C  + NQ    FN  +  +   L    P +RFT++DI  +  DL+ N+  YGF      CCG G        Q+ C         +    PC +  +YV WD  H TEA N
Sbjct:  210 LYAEGARNYWIHNTGPLGCLAQVVSIFGEDKSKLDEFGCVSDHNQAAKLFNLQLHGLFKKLPQQYPNSRFTYVDIFSIKSDLILNHSKYGFDHSIMVCCGTGGPPLNYDDQVGCGKTARSNGTIITAKPCYDSSKYVNWDGIHYTEAAN 358          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: EXL5_ARATH (GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana GN=EXL5 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 7.900e-13
Identity = 41/130 (31.54%), Postives = 68/130 (52.31%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPS--ILAQNQMDRCSEEVNQLVMPFNANVKTMINNLN--ANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTE 444
            LY+ GARKF + G+  +GC+P   ++       C+   N +   +N  +K+ I +    ++  GARF ++D+     D++ N+R YGF+    GCC           L    PC+N ++YVF+D  HP+E
Sbjct:  219 LYDHGARKFAVMGVIPLGCLPMSRLIFGGFFVWCNFLANTISEDYNKKLKSGIKSWRGASDFRGARFVYVDMYNSLMDVINNHRKYGFTHEKNGCC---------CMLTAIVPCSNPDKYVFYDFAHPSE 339          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.688e-12
Identity = 44/134 (32.84%), Postives = 60/134 (44.78%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSI--LAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGR-NGGQITCLP--FQTPCANREQYVFWDAFHPTEAVN 453
            +Y +GARK  +  L   GC+P+   L       C   +N     FN  +    + L       +    DI     DL+ N    GF+   +GCCG G      + C P  F T C+N  QYVFWD+ HP+EA N
Sbjct:  205 VYAVGARKIGVTSLPPTGCLPAARTLFGFHEKGCVSRLNTDAQNFNKKLNAAASKLQKQYSDLKIVVFDIYSPLYDLVQNPSKSGFTEATKGCCGTGTVETTSLLCNPKSFGT-CSNATQYVFWDSVHPSEAAN 337          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12
Identity = 36/133 (27.07%), Postives = 65/133 (48.87%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQNQMD-----RCSEEVNQLVMPFNANVKTMINNLNANLP--GARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTPCANREQYVFWDAFHPTE 444
            L+  GARK  +AGL  +GC+P ++     +     RC +  + +   +N  ++  +  +   L   G++  ++D+     +++ + R +GF  +  GCCG G       C P    C N   YVF+D+ HP+E
Sbjct:  222 LWKEGARKITVAGLPPIGCLPIVITLFSGEALTNRRCIDRFSTVATNYNFLLQKQLALMQVGLAHLGSKIFYLDVYNPVYEVIRDPRKFGFEEVFSGCCGSGYLEASFLCNPKSYVCPNTSAYVFFDSIHPSE 354          
The following BLAST results are available for this feature:
BLAST of CX291190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
GDL52_ARATH3.207e-1433.85GDSL esterase/lipase At3g14820 OS=Arabidopsis thal... [more]
APG_ARATH4.189e-1430.71Anter-specific proline-rich protein APG OS=Arabido... [more]
APG_BRANA1.219e-1330.71Anther-specific proline-rich protein APG (Fragment... [more]
EXL4_ARATH1.592e-1333.08GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana ... [more]
GDL47_ARATH3.546e-1328.36GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
GRIP4_ARATH6.049e-1333.58GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]
GDL49_ARATH7.900e-1329.53GDSL esterase/lipase At3g05180 OS=Arabidopsis thal... [more]
EXL5_ARATH7.900e-1331.54GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana ... [more]
APG2_ARATH6.688e-1232.84GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL86_ARATH8.734e-1227.07GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC03005B04SK OF2 Citrus clementina cDNA clone C03005B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291190 ID=CX291190; Name=CX291190; organism=Citrus clementina; type=EST; length=461bp
TTTTTTTTTAGCTTGTTAACATATTTATATAACTTGTATTAAGTATTGAT
TGAAAATCTATAGACCCTTTACAATTTGGGAGCAAGGAAATTTGTGTTGG
CCGGGTTAGGAAGAATGGGATGTATTCCAAGCATTTTGGCTCAAAATCAA
ATGGATCGCTGTTCAGAAGAAGTGAATCAACTTGTTATGCCTTTTAATGC
AAATGTGAAGACTATGATTAACAATCTTAATGCCAATCTTCCTGGTGCAA
GATTCACCTTCATTGACATTGCCCGCATGTTTGAAGATCTCCTCACCAAT
TATAGATCATACGGATTCAGTGTAATAGATCGAGGGTGCTGTGGCATTGG
ACGAAACGGAGGCCAAATTACATGTCTTCCATTCCAAACACCATGTGCAA
ATCGAGAACAATACGTTTTCTGGGATGCATTTCACCCAACAGAAGCTGTG
AACATTATGTT
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