CX291190

Overview
NameCX291190
Unique NameCX291190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length461
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12
Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSIL-AQNQMDR----CSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCC--GIGR----------NGGQITCLPFQTPCANREQYVFWDAFHPTEAVNIM 459
            LY  GAR F +   G  GC+P +L A   + R    C + +N + + FN  +K  I  L   LP + FT++D+     +L+T  ++ GF      CC   IGR          NG ++    + + C NR+ ++ WD  H TE  N++
Sbjct:  202 LYKEGARFFSIHNTGPTGCLPYLLKAFPAIPRDPYGCLKPLNNVAIEFNKQLKNKITQLKKELPSSFFTYVDVYSAKYNLITKAKALGFIDPFDYCCVGAIGRGMGCGKTIFLNGTEL----YSSSCQNRKNFISWDGIHYTETANML 345          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.319e-11
Identity = 39/137 (28.47%), Postives = 61/137 (44.53%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPS--ILAQNQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCC------GIGRNGGQITCLPFQTPCANREQYVFWDAFHPTEAVN 453
            +YNLG RKF +   G   C P+  ++ Q ++  C + V +L+   N  +   +  LN  L G ++   D      + + +   YGF    + CC      GI   GG++        C N   Y+F+D FH TE  N
Sbjct:  211 VYNLGGRKFGILNTGPYDCAPASLVIDQTKIRSCFQPVTELINMHNEKLLNGLRRLNHELSGFKYALHDYHTSLSERMNDPSKYGFKEGKKACCGSGPLRGINTCGGRMGLSQSYELCENVTDYLFFDPFHLTEKAN 347          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: EXL6_ARATH (GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana GN=EXL6 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.394e-11
Identity = 39/131 (29.77%), Postives = 68/131 (51.91%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQ--NQMDRCSEEVNQLVMPFNANVKTMINN--LNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQ-TPCANREQYVFWDAFHPTE 444
            LY+LGARKF + G+  +GC+P   A        C+  +N++   FN  ++  + +  +  +   A+F ++DI     DL+ N  +YGF+   + CC          C+P    PC + ++YVF+D  HP++
Sbjct:  204 LYDLGARKFAVMGVMPVGCLPIHRASFGGVFGWCNFLLNRITEDFNMKLQKGLTSYAVEYDFKDAKFVYVDIYGTLMDLVKNPMAYGFTEAKKACC----------CMPNAIIPCFHPDKYVFYDFAHPSQ 324          
BLAST of CX291190 vs. ExPASy Swiss-Prot
Match: GDL19_ARATH (GDSL esterase/lipase At1g54010 OS=Arabidopsis thaliana GN=At1g54010 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.657e-11
Identity = 40/138 (28.99%), Postives = 62/138 (44.93%), Query Frame = 1
Query:   67 LYNLGARKFVLAGLGRMGCIPSILAQ--NQMDRCSEEVNQLVMPFNANVKTMINNLNANLPGA---RFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLP--FQTPCANREQYVFWDAFHPTEAVNIM 459
            LY+ GA KFV+  L  +GC+P +  +    MD+C E++N L    N  +  M+N L    P +   +FT  D            +++ F V +  CCG+G +       P      C  +  Y+F+D  H TE    M
Sbjct:  196 LYSSGASKFVIQTLAPLGCLPIVRQEFNTGMDQCYEKLNDLAKQHNEKIGPMLNELARTAPASAPFQFTVFDFYNAILTRTQRNQNFRFFVTNASCCGVGTHDAYGCGFPNVHSRLCEYQRSYLFFDGRHNTEKAQEM 333          
The following BLAST results are available for this feature:
BLAST of CX291190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
GDL54_ARATH8.734e-1230.41GDSL esterase/lipase At3g27950 OS=Arabidopsis thal... [more]
GLIP1_ARATH3.319e-1128.47GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=... [more]
EXL6_ARATH7.394e-1129.77GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana ... [more]
GDL19_ARATH9.657e-1128.99GDSL esterase/lipase At1g54010 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC03005B04SK OF2 Citrus clementina cDNA clone C03005B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291190 ID=CX291190; Name=CX291190; organism=Citrus clementina; type=EST; length=461bp
TTTTTTTTTAGCTTGTTAACATATTTATATAACTTGTATTAAGTATTGAT
TGAAAATCTATAGACCCTTTACAATTTGGGAGCAAGGAAATTTGTGTTGG
CCGGGTTAGGAAGAATGGGATGTATTCCAAGCATTTTGGCTCAAAATCAA
ATGGATCGCTGTTCAGAAGAAGTGAATCAACTTGTTATGCCTTTTAATGC
AAATGTGAAGACTATGATTAACAATCTTAATGCCAATCTTCCTGGTGCAA
GATTCACCTTCATTGACATTGCCCGCATGTTTGAAGATCTCCTCACCAAT
TATAGATCATACGGATTCAGTGTAATAGATCGAGGGTGCTGTGGCATTGG
ACGAAACGGAGGCCAAATTACATGTCTTCCATTCCAAACACCATGTGCAA
ATCGAGAACAATACGTTTTCTGGGATGCATTTCACCCAACAGAAGCTGTG
AACATTATGTT
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