CX291248

Overview
NameCX291248
Unique NameCX291248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length253
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN5_ARATH (Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g48930 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.782e-15
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSP-NPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSY+VG+G +YP  VHHRGSS+PSI A    ++C  GF   Y RS  +PNV+ GA++GGP            Y+QSEP     AP
Sbjct:  401 MSYVVGYGPKYPIRVHHRGSSIPSIFAQRSSVSCVQGFDSWYRRSQGDPNVIYGALVGGPDENDNYSDDRSNYEQSEPTLSGTAP 485          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN2_ARATH (Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.782e-15
Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINA 249
            MSY+VG+GE+YP+ VHHRG+S+P+         C DGF++L S  PNPNV  GA++GGP              Q+EP+TY +A
Sbjct:  418 MSYLVGYGEKYPEFVHHRGASIPADAT----TGCKDGFKWLNSDEPNPNVAYGALVGGPFLNDTFIDARNNSMQNEPSTYNSA 496          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN15_ARATH (Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44570 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.939e-15
Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSR-SPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVG+G  YP+  HHRG+S+ SI   P  + CN GF+  Y+   PNPN+L GAI+GGP            +Q  EP T   AP
Sbjct:  399 MSYMVGYGTNYPKRPHHRGASIVSIKNDPKPVTCNGGFEAWYNNPKPNPNLLVGAIVGGPDEYDAYGDERSDFQHGEPDTVTVAP 483          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN11_ARATH (Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.100e-14
Identity = 38/84 (45.24%), Postives = 48/84 (57.14%), Query Frame = 1
Query:    4 SYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRS-PNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            SY+VG+G +YP  VHHRG+S+ S   H   I C  G+   Y RS PNP+VL GA++GGP            Y Q+E  TY  AP
Sbjct:  413 SYLVGYGPKYPIRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDHQDDFDDRRGNYVQTEACTYNTAP 496          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN13_ARATH (Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44550 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSR-SPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVG G  YP+  HHR +S+ SI      + C+ G+   Y+  +PNPNVL+GA++GGP            +QQ+EPAT   AP
Sbjct:  397 MSYMVGVGTNYPKKPHHRAASIVSIRQDKTPVTCSGGYDKWYNNPAPNPNVLAGAVVGGPDDNDVYGDERSNFQQAEPATVTTAP 481          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN22_ORYSJ (Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRS-PNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            +SYMVG+G RYP  VHHRG+S+ S       I C  GF   + R   NPNVL+GAI+GGP            Y Q+E  TY  AP
Sbjct:  435 LSYMVGYGRRYPARVHHRGASIVSHKEDGRFIGCVQGFDDWFGRGRANPNVLAGAIVGGPSRRDEFRDDRANYMQTEACTYNTAP 519          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN12_ARATH (Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44540 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 37/85 (43.53%), Postives = 49/85 (57.65%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSR-SPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVG G  YP+  HHR +S+ SI      + C+ G+   Y+  +PNPNVL GA++GGP            +QQ+EPAT   AP
Sbjct:  398 MSYMVGVGTNYPKKPHHRAASIVSIRKDKTPVTCSGGYDKWYNNPAPNPNVLMGALVGGPNENDVYGDERSNFQQAEPATVTVAP 482          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN10_ARATH (Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75680 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.589e-13
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1
Query:    4 SYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINA 249
            S++VG+G++YPQ VHHRG+S+P+         C DGF++  S  PNPN+  GA++GGP              Q+EP TY NA
Sbjct:  428 SFVVGYGDKYPQFVHHRGASIPADAT----TGCLDGFKWFNSTKPNPNIAYGALVGGPFFNETFTDSRENPMQNEPTTYNNA 505          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN7_ORYSJ (Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYS-RSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            +SY+VG+G +YP  VHHR +S+       + I C  GF + +  RS NPNVL GAI+GGP            Y Q+E  TY  AP
Sbjct:  415 ISYLVGYGAKYPNRVHHRAASIVPYKHSKEFIGCTQGFDHWFGRRSSNPNVLVGAIVGGPDRRDRFRDNRENYMQTEACTYNTAP 499          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN24_ORYSJ (Endoglucanase 24 OS=Oryza sativa subsp. japonica GN=Os09g0533900 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATY 240
            +SY+VG+G  YPQ VHHRG+S+P+     D      GFQYL+S SPNPNV  GA++GGP              Q+E +TY
Sbjct:  431 LSYLVGYGSSYPQQVHHRGASIPA-----DAKTGCKGFQYLHSTSPNPNVAMGALVGGPFQNDTFVDSRDNAVQTESSTY 505          
The following BLAST results are available for this feature:
BLAST of CX291248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
GUN5_ARATH3.782e-1547.06Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g489... [more]
GUN2_ARATH3.782e-1545.78Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g199... [more]
GUN15_ARATH4.939e-1545.88Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN11_ARATH1.100e-1445.24Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32... [more]
GUN13_ARATH2.451e-1443.53Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN22_ORYSJ1.217e-1345.88Endoglucanase 22 OS=Oryza sativa subsp. japonica G... [more]
GUN12_ARATH1.217e-1343.53Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN10_ARATH1.589e-1342.68Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75... [more]
GUN7_ORYSJ2.710e-1342.35Endoglucanase 7 OS=Oryza sativa subsp. japonica GN... [more]
GUN24_ORYSJ2.710e-1346.25Endoglucanase 24 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionC03005G11SK OF2 Citrus clementina cDNA clone C03005G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291248 ID=CX291248; Name=CX291248; organism=Citrus clementina; type=EST; length=253bp
ATGTCTTACATGGTGGGCTTCGGAGAGAGGTATCCGCAACATGTTCATCA
CAGGGGTTCATCTCTACCGTCCATCCATGCACATCCTGATCACATTGCCT
GCAACGATGGATTCCAGTACCTCTACTCTAGATCACCCAATCCAAATGTT
CTCAGTGGAGCTATATTAGGTGGGCCTGATAATAGAGACAATTTTGCCGA
TAATCGTAATAATTATCAGCAGTCAGAACCAGCTACATACATCAATGCGC
CGT
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