CX291249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_RICFE (50S ribosomal protein L3 OS=Rickettsia felis GN=rplC PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.910e-23 Identity = 57/158 (36.08%), Postives = 85/158 (53.80%), Query Frame = 3 Query: 9 SLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 +L +G KK +TKP F + K KL+EF ++E+ + I SL V +F GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ +D R L+ ++G +PG +++ +K Sbjct: 48 ALVIGIKDKKISRVTKPMKQVFANAKISPKTKLKEFRISEENFIDIAASLEVDYFTAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIFAVDKERKLIMIQGSIPGHKNSYLSVK 205
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_MESSB (50S ribosomal protein L3 OS=Mesorhizobium sp. (strain BNC1) GN=rplC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 59/160 (36.88%), Postives = 85/160 (53.12%), Query Frame = 3 Query: 3 FFSLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 + ++ +G G K K+ +K GHF A V K K+ EF V+ + LL +G + HF+PGQ VD+ R F G A+HG S+SHR+ GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G+++ ++ Sbjct: 46 YTAVQLGVGLAKVKNTSKALRGHFAAASVEPKAKVAEFRVSPENLLDVGAEITADHFVPGQKVDVTGTSIGKGFQGVMKRHNFGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDRRVTTQNLEVVSTDTERGLILVRGAVPGSKGSWIMVR 205
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_BRUSI (50S ribosomal protein L3 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=rplC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 3 FFSLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 + ++ +G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++ Sbjct: 46 YTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVR 205
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_BRUO2 (50S ribosomal protein L3 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rplC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 3 FFSLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 + ++ +G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++ Sbjct: 46 YTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVR 205
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_BRUME (50S ribosomal protein L3 OS=Brucella melitensis GN=rplC PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 3 FFSLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 + ++ +G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++ Sbjct: 46 YTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVR 205
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_BRUMB (50S ribosomal protein L3 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rplC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 3 FFSLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 + ++ +G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++ Sbjct: 46 YTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVR 205
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_BRUC2 (50S ribosomal protein L3 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rplC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 3 FFSLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 + ++ +G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++ Sbjct: 46 YTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVR 205
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_BRUAB (50S ribosomal protein L3 OS=Brucella abortus GN=rplC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 3 FFSLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 + ++ +G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++ Sbjct: 46 YTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVR 205
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_BRUA2 (50S ribosomal protein L3 OS=Brucella abortus (strain 2308) GN=rplC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 3 FFSLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 + ++ +G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++ Sbjct: 46 YTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVR 205
BLAST of CX291249 vs. ExPASy Swiss-Prot
Match: RL3_BRUA1 (50S ribosomal protein L3 OS=Brucella abortus (strain S19) GN=rplC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 3 FFSLHVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIK 482 + ++ +G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++ Sbjct: 46 YTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVR 205 The following BLAST results are available for this feature:
BLAST of CX291249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291249 ID=CX291249; Name=CX291249; organism=Citrus clementina; type=EST; length=484bpback to top |