CX291262 | Citrus Genome Database

Overview


Name	CX291262
Unique Name	CX291262
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	347

Libraries


Library Name	Type
OF2	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.095e-30
Identity = 67/115 (58.26%), Postives = 79/115 (68.70%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT NE+LL D  YIGLRQ+R  G EY + L EFM AV   YG   LIQFEDFAN NAF LL+KY   +  FNDDIQGTASV +AG+++A++     L+DQ  LF GA EA  G
Sbjct:  180 DVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALG 294

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.432e-30
Identity = 68/115 (59.13%), Postives = 77/115 (66.96%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+NE LL D  YIGLR KR  GQ Y +LL EFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+D   LF GA EA  G
Sbjct:  183 DVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALG 297

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.432e-30
Identity = 68/115 (59.13%), Postives = 77/115 (66.96%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+NE LL D  YIGLR KR  GQ Y +LL EFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+D   LF GA EA  G
Sbjct:  183 DVGTDNEALLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALG 297

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.210e-29
Identity = 66/115 (57.39%), Postives = 75/115 (65.22%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT NE+LL D  YIGLR +R  G EY   L EFM A    YG   LIQFEDFAN NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+DQ  LF GA EA  G
Sbjct:  194 DVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALG 308

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.064e-29
Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN  LL+D FYIGLR KR  G++Y  LL  FM A    YG++ LIQFEDFAN NAF LL+KY   + +FNDDIQGTASV++AGL++  +     ++ +++LF GA  A TG
Sbjct:  258 DVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTG 372

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 2.696e-29
Identity = 66/115 (57.39%), Postives = 75/115 (65.22%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT NE+LL D  YIGLR +R  G EY   L EFM A    YG   LIQFEDFAN NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+DQ  LF GA EA  G
Sbjct:  194 DVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANLNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALG 308

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.696e-29
Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNNE+LL D  YIGL+ +R  G+EY +LL EFM AV   +G   LIQFEDFAN NAF LL KY   + +FNDDIQGTASV +AG+++A++     L++  F+F GA EA  G
Sbjct:  229 DVGTNNEELLRDPLYIGLKHQRVRGEEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNRLSNHVFVFQGADEAAMG 343

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.696e-29
Identity = 63/115 (54.78%), Postives = 78/115 (67.83%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N  LL D FY+GL QKR   Q+Y +L+ EFM A+   YG   LIQFEDF NHNAF  L KY   +  FNDDIQGTA+V LAGL++A K +   +++ + LFLGA EA  G
Sbjct:  204 DVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALG 318

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.338e-28
Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNNE+LL D  YIGL+ +R  G+ Y +LL EFM AV   +G   LIQFEDFAN NAF LL KY   + +FNDDIQGTASV +AG+++A++     L++  F+F GA EA  G
Sbjct:  229 DVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMG 343

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.981e-28
Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N  LL D FY+GL QKR   Q Y +L+ EFM A+   YG   LIQFEDF NHNAF  L KY   +  FNDDIQGTA+V L+GL++A + +   +++ + LFLGA EA  G
Sbjct:  204 DVGTDNMALLKDPFYMGLYQKRDRSQLYDDLMDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAALG 318

The following BLAST results are available for this feature:

BLAST of CX291262 vs. ExPASy Swiss-Prot

BLAST of CX291262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140


Match Name	E-value	Identity	Description
MAOX_PIG	1.095e-30	58.26	NADP-dependent malic enzyme (Fragment) OS=Sus scro...	[more]
MAOX_COLLI	5.432e-30	59.13	NADP-dependent malic enzyme OS=Columba livia GN=ME...	[more]
MAOX_ANAPL	5.432e-30	59.13	NADP-dependent malic enzyme OS=Anas platyrhynchos ...	[more]
MAOX_MOUSE	1.210e-29	57.39	NADP-dependent malic enzyme OS=Mus musculus GN=Me1...	[more]
MAOM_ASCSU	2.064e-29	54.78	NAD-dependent malic enzyme, mitochondrial (Fragmen...	[more]
MAOX_RAT	2.696e-29	57.39	NADP-dependent malic enzyme OS=Rattus norvegicus G...	[more]
MAON_MOUSE	2.696e-29	55.65	NADP-dependent malic enzyme, mitochondrial OS=Mus ...	[more]
MAOM_HUMAN	2.696e-29	54.78	NAD-dependent malic enzyme, mitochondrial OS=Homo ...	[more]
MAON_HUMAN	1.338e-28	54.78	NADP-dependent malic enzyme, mitochondrial OS=Homo...	[more]
MAOM_MOUSE	2.981e-28	53.04	NAD-dependent malic enzyme, mitochondrial OS=Mus m...	[more]

Pages

Properties


Property Name	Value
Genbank description	C03006A03SK OF2 Citrus clementina cDNA clone C03006A03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX291262 ID=CX291262; Name=CX291262; organism=Citrus clementina; type=EST; length=347bp
TTGATGTGGGGACAAACAATGAGAAGTTGTTGGATGATGAGTTCTACATT
GGGCTCAGGCAGAAGAGGGCTATTGGACAGGAATATGCTGAACTGCTACA
TGAATTCATGACAGCTGTGAAGCANAATTATGGGGAGAGAATTCTCATTC
AGTTTGAAGACTTTGCAAACCACAATGCCTTTGATCTGCTTGAAAAATAT
GGCACTACTCATCTTGTTTTCAATGATGATATTCAGGGGACAGCATCTGT
GGTCCTTGCAGGTCTTATTTCAGCGATGAAATTTCTTGGAGGAAGCTTAG
CCGACCAAAGATTTTTATTCCTTGGTGCACGAGAAGCTGGCACTGGA