CX291262 | Citrus Genome Database

Overview


Name	CX291262
Unique Name	CX291262
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	347

Libraries


Library Name	Type
OF2	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_AERHH (NAD-dependent malic enzyme OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sfcA PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.644e-26
Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D FY+G R  R  G+EYAE +  F+ AVK  + + IL+QFEDFA +NA  LL +Y      FNDDIQGTA+V L  LI+A K  G  L+++R  FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPFYMGWRNPRISGEEYAEFVDAFIQAVKRRWPD-ILLQFEDFAQNNAMPLLNRYKNELCCFNDDIQGTAAVTLGSLIAACKASGAKLSEKRVAFLGAGSAGCG 309

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.759e-26
Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL D FY+G R  R  G+EYAE +  F+ AVK  + + IL+QFEDFA +NA  LL +Y      FNDDIQGTA+V L  LI+A K  G  L+++R  FLGA  AG G
Sbjct:  196 DVGTNNQQLLSDPFYMGWRNPRISGEEYAEFVDAFIQAVKRRWPD-ILLQFEDFAQNNAMPLLNRYKNELCCFNDDIQGTAAVTLGSLIAACKASGAKLSEKRVAFLGAGSAGCG 309

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.060e-25
Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R  G+EY   ++EF+ AVK  +   +L+QFEDFA  NA  LLE+Y      FNDDIQGTA+V L  LI+A +  GG L +Q+ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRHPRITGEEYDNFVNEFIQAVKSRW-PNVLLQFEDFAQKNAMPLLERYRDEVCCFNDDIQGTAAVTLGTLIAASRAAGGKLCEQKVVFLGAGSAGCG 309

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHEDO (NAD-dependent malic enzyme OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sfcA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.085e-25
Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N++LLDD  Y+G R +R  GQ+YA+ +  FM AV   + + +LIQFEDFA  NA  LLE+Y   +  FNDDIQGTA+V +  L++A K     L+ QR +FLGA  AG G
Sbjct:  193 DVGTDNQELLDDPMYMGWRHRRIEGQDYADFVEAFMEAVHRRWPD-VLIQFEDFAQRNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAASKAANTQLSKQRVVFLGAGSAGCG 306

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.872e-25
Identity = 59/115 (51.30%), Postives = 75/115 (65.22%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N +LL+D  Y+G R +R  G EYAE + EFM AV   + +  LIQFEDFA  NA  LLE+Y   +  FNDDIQGTA+V +  L++A K     L++QR  FLGA  AG G
Sbjct:  193 DVGTDNPQLLEDPMYMGWRHQRIGGDEYAEFVEEFMQAVSRRWPDA-LIQFEDFAQKNAMPLLERYKDQYCSFNDDIQGTAAVTVGSLLAACKAANSKLSEQRITFLGAGSAGCG 306

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHIBS (NAD-dependent malic enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=sfcA PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.531e-24
Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R I  EY E + EF+ AVK  + + +L+QFEDFA  NA  LL +Y      FNDDIQGTA+V +  LI+A +  GG L++++ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRNPRIIDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCG 309

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHIB3 (NAD-dependent malic enzyme OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=sfcA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.531e-24
Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R I  EY E + EF+ AVK  + + +L+QFEDFA  NA  LL +Y      FNDDIQGTA+V +  LI+A +  GG L++++ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRNPRIIDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCG 309

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_VIBFM (NAD-dependent malic enzyme OS=Vibrio fischeri (strain MJ11) GN=sfcA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.999e-24
Identity = 58/115 (50.43%), Postives = 74/115 (64.35%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN + L D  Y+G R  R  G EYA+ + +F+ AV+  + E  L+QFEDFA  NA  LLE+Y      FNDDIQGTA+V +  L++A K  G SL++QR  FLGA  AG G
Sbjct:  193 DVGTNNPQRLADPMYMGWRHPRVTGDEYADFVEDFIQAVQRRWPEA-LVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLAACKAAGSSLSEQRVTFLGAGSAGCG 306

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_VIBF1 (NAD-dependent malic enzyme OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sfcA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.999e-24
Identity = 58/115 (50.43%), Postives = 74/115 (64.35%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN + L D  Y+G R  R  G EYA+ + +F+ AV+  + E  L+QFEDFA  NA  LLE+Y      FNDDIQGTA+V +  L++A K  G SL++QR  FLGA  AG G
Sbjct:  193 DVGTNNPQRLADPMYMGWRHPRVTGDEYADFVEDFIQAVQRRWPEA-LVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLAACKAAGSSLSEQRVTFLGAGSAGCG 306

[Close]

BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.999e-24
Identity = 57/115 (49.57%), Postives = 75/115 (65.22%), Query Frame = 3

Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N  LL+D  Y+G R  R  G+EY+E +  FM AV   + + +LIQFEDFA  NA  +LE+Y   +  FNDDIQGTA+V +  L++A +  G  L+DQR  FLGA  AG G
Sbjct:  193 DVGTDNPHLLEDPMYMGWRHPRIGGEEYSEFIEAFMEAVHRRWPD-VLIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACQAAGTKLSDQRITFLGAGSAGCG 306

The following BLAST results are available for this feature:

BLAST of CX291262 vs. ExPASy Swiss-Prot

BLAST of CX291262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140


Match Name	E-value	Identity	Description
MAO1_AERHH	3.644e-26	53.04	NAD-dependent malic enzyme OS=Aeromonas hydrophila...	[more]
MAO1_AERS4	4.759e-26	53.04	NAD-dependent malic enzyme OS=Aeromonas salmonicid...	[more]
MAO1_ERWT9	1.060e-25	51.30	NAD-dependent malic enzyme OS=Erwinia tasmaniensis...	[more]
MAO1_SHEDO	3.085e-25	50.43	NAD-dependent malic enzyme OS=Shewanella denitrifi...	[more]
MAO1_SHEFN	6.872e-25	51.30	NAD-dependent malic enzyme OS=Shewanella frigidima...	[more]
MAO1_SHIBS	1.531e-24	49.57	NAD-dependent malic enzyme OS=Shigella boydii sero...	[more]
MAO1_SHIB3	1.531e-24	49.57	NAD-dependent malic enzyme OS=Shigella boydii sero...	[more]
MAO1_VIBFM	1.999e-24	50.43	NAD-dependent malic enzyme OS=Vibrio fischeri (str...	[more]
MAO1_VIBF1	1.999e-24	50.43	NAD-dependent malic enzyme OS=Vibrio fischeri (str...	[more]
MAO1_SHEAM	1.999e-24	49.57	NAD-dependent malic enzyme OS=Shewanella amazonens...	[more]

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Properties


Property Name	Value
Genbank description	C03006A03SK OF2 Citrus clementina cDNA clone C03006A03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX291262 ID=CX291262; Name=CX291262; organism=Citrus clementina; type=EST; length=347bp
TTGATGTGGGGACAAACAATGAGAAGTTGTTGGATGATGAGTTCTACATT
GGGCTCAGGCAGAAGAGGGCTATTGGACAGGAATATGCTGAACTGCTACA
TGAATTCATGACAGCTGTGAAGCANAATTATGGGGAGAGAATTCTCATTC
AGTTTGAAGACTTTGCAAACCACAATGCCTTTGATCTGCTTGAAAAATAT
GGCACTACTCATCTTGTTTTCAATGATGATATTCAGGGGACAGCATCTGT
GGTCCTTGCAGGTCTTATTTCAGCGATGAAATTTCTTGGAGGAAGCTTAG
CCGACCAAAGATTTTTATTCCTTGGTGCACGAGAAGCTGGCACTGGA