CX291262

Overview
NameCX291262
Unique NameCX291262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length347
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_ALISL (NAD-dependent malic enzyme OS=Aliivibrio salmonicida (strain LFI1238) GN=sfcA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.818e-24
Identity = 58/115 (50.43%), Postives = 72/115 (62.61%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN + L D  Y+G R  R  G EY + + EF+ AV+  + +  L+QFEDFA  NA  LLE+Y      FNDDIQGTA+V +  L++A K  G SLA QR  FLGA  AG G
Sbjct:  193 DVGTNNPQRLADPMYMGWRHPRVTGNEYKDFVEEFIQAVQRRWPQA-LVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLAACKAAGSSLAQQRVTFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHESA (NAD-dependent malic enzyme OS=Shewanella sp. (strain ANA-3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.598e-24
Identity = 58/115 (50.43%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N +LL+D  Y+G R  R  G+EYAE +  FM AV   + +  LIQFEDFA  NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGA  AG G
Sbjct:  193 DVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRIAFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHESR (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.923e-24
Identity = 58/115 (50.43%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N +LL+D  Y+G R  R  G+EYAE +  FM AV   + +  LIQFEDFA  NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGA  AG G
Sbjct:  193 DVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKERYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRVAFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHESM (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.923e-24
Identity = 58/115 (50.43%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N +LL+D  Y+G R  R  G+EYAE +  FM AV   + +  LIQFEDFA  NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGA  AG G
Sbjct:  193 DVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKERYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRVAFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHEON (NAD-dependent malic enzyme OS=Shewanella oneidensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.923e-24
Identity = 58/115 (50.43%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N +LL+D  Y+G R  R  G+EYAE +  FM AV   + +  LIQFEDFA  NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGA  AG G
Sbjct:  193 DVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKERYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRVAFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHEHH (NAD-dependent malic enzyme OS=Shewanella halifaxensis (strain HAW-EB4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.923e-24
Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N  LL+D  Y+G+R  R  G+EY E +  FM AV   + +  LIQFEDFA  NA  LLE+Y   +  FNDDIQGTA+V +  L++A K     L++QR  FLGA  AG G
Sbjct:  193 DVGTDNPHLLEDPMYMGMRSPRIGGEEYKEFVEAFMQAVNRRWPDA-LIQFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKSKLSEQRITFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHESW (NAD-dependent malic enzyme OS=Shewanella sp. (strain W3-18-1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.296e-23
Identity = 58/115 (50.43%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N +LL+D  Y+G R  R  G+EYAE +  FM AV   + +  LIQFEDFA  NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGA  AG G
Sbjct:  193 DVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGCLLAACKAAGTELNQQRIAFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPW (NAD-dependent malic enzyme OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sfcA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.296e-23
Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N  LL+D  Y+G R  R  G+EY E +  FM AV   + +  LIQFEDFA  NA  LLE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGA  AG G
Sbjct:  193 DVGTDNPHLLEDPMYMGWRNPRIGGEEYTEFVEAFMQAVHRRWPDA-LIQFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAGTQLCQQRITFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPC (NAD-dependent malic enzyme OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=sfcA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.296e-23
Identity = 58/115 (50.43%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N +LL+D  Y+G R  R  G+EYAE +  FM AV   + +  LIQFEDFA  NA  +LE+Y   +  FNDDIQGTA+V +  L++A K  G  L  QR  FLGA  AG G
Sbjct:  193 DVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDT-LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGCLLAACKAAGTELNQQRIAFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.296e-23
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R    EY E + EF+ AVK  + + +L+QFEDFA  NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCG 309
The following BLAST results are available for this feature:
BLAST of CX291262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ALISL5.818e-2450.43NAD-dependent malic enzyme OS=Aliivibrio salmonici... [more]
MAO1_SHESA7.598e-2450.43NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESR9.923e-2450.43NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESM9.923e-2450.43NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEON9.923e-2450.43NAD-dependent malic enzyme OS=Shewanella oneidensi... [more]
MAO1_SHEHH9.923e-2449.57NAD-dependent malic enzyme OS=Shewanella halifaxen... [more]
MAO1_SHESW1.296e-2350.43NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEPW1.296e-2350.43NAD-dependent malic enzyme OS=Shewanella piezotole... [more]
MAO1_SHEPC1.296e-2350.43NAD-dependent malic enzyme OS=Shewanella putrefaci... [more]
MAO1_CITK81.296e-2348.70NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]

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Properties
Property NameValue
Genbank descriptionC03006A03SK OF2 Citrus clementina cDNA clone C03006A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291262 ID=CX291262; Name=CX291262; organism=Citrus clementina; type=EST; length=347bp
TTGATGTGGGGACAAACAATGAGAAGTTGTTGGATGATGAGTTCTACATT
GGGCTCAGGCAGAAGAGGGCTATTGGACAGGAATATGCTGAACTGCTACA
TGAATTCATGACAGCTGTGAAGCANAATTATGGGGAGAGAATTCTCATTC
AGTTTGAAGACTTTGCAAACCACAATGCCTTTGATCTGCTTGAAAAATAT
GGCACTACTCATCTTGTTTTCAATGATGATATTCAGGGGACAGCATCTGT
GGTCCTTGCAGGTCTTATTTCAGCGATGAAATTTCTTGGAGGAAGCTTAG
CCGACCAAAGATTTTTATTCCTTGGTGCACGAGAAGCTGGCACTGGA
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