CX291262

Overview
NameCX291262
Unique NameCX291262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length347
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPA (NAD-dependent malic enzyme OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.693e-23
Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N  LL+D  Y+G+R  R  G+EY E +  FM AV   + +  LIQFEDFA  NA  LLE+Y   +  FNDDIQGTA+V +  L++A K     L++QR  FLGA  AG G
Sbjct:  193 DVGTDNPHLLEDPMYMGMRSPRIGGEEYTEFVEAFMQAVHRRWPDA-LIQFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKTQLSEQRITFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.693e-23
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R    EY   + +F+ AVK  +   +L+QFEDFA  NA  LLE+Y      FNDDIQGTA+V L  LI+A +  G  L++Q+ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDDFIQAVKQRW-PNVLLQFEDFAQKNAMPLLERYRDEICCFNDDIQGTAAVTLGTLIAASRAAGSQLSEQKIVFLGAGSAGCG 309
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.211e-23
Identity = 57/115 (49.57%), Postives = 72/115 (62.61%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N  LL+D  Y+G R +R  G+EY E +  FM AV   + +  LIQFEDFA  NA  LLE+Y   +  FNDDIQGTA+V +  L++A K     L +QR  FLGA  AG G
Sbjct:  193 DVGTDNPHLLEDPMYMGWRNQRIGGEEYKEFVEAFMQAVNRRWPDA-LIQFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKSQLCEQRIAFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHELP (NAD-dependent malic enzyme OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.211e-23
Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N  LL+D  Y+G R +R  G+EYAE +  FM AV   + +  LIQFEDFA  NA  LLE+Y   +  FNDDIQGTA+V +  L++A +     L+ QR  FLGA  AG G
Sbjct:  193 DVGTDNPHLLEDPMYMGWRNQRIGGEEYAEFVEAFMEAVHRRWPDA-LIQFEDFAQKNAMPLLERYKDRYCCFNDDIQGTAAVTVGSLLAACQAADSKLSQQRIAFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.211e-23
Identity = 57/115 (49.57%), Postives = 71/115 (61.74%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G RQ R  G EY E + + +T ++  +    LIQFEDFA  NA  LL KY      FNDDIQGTA+V +  LI+A +  G  L DQ   FLGA  AG G
Sbjct:  197 DVGTNNQQLLNDPIYMGWRQPRISGDEYYEFIDQVLTGIRRRW-PHALIQFEDFAQKNAMPLLTKYRDKFCCFNDDIQGTAAVSVGSLIAASRAAGKQLKDQTITFLGAGSAGCG 310
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_PSEU2 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sfcA PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.887e-23
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN +LLDD  Y+G R +R  G+EY + +  F+ AV+  + + +L+QFEDFA  NA  LLEKY      FNDDIQGTASV +  L++A K    +L  Q+ +F+GA  AG G
Sbjct:  193 DVGTNNRELLDDPMYMGWRHERVSGKEYEDFIALFIDAVQRRWPD-VLLQFEDFAQSNAMPLLEKYRDELCCFNDDIQGTASVAVGTLLAACKAKNETLGQQKVVFVGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_PSESM (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. tomato GN=sfcA PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.887e-23
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN +LLDD  Y+G R +R  G+EY + +  F+ AV+  + + +L+QFEDFA  NA  LLEKY      FNDDIQGTASV +  L++A K    +L  Q+ +F+GA  AG G
Sbjct:  193 DVGTNNRELLDDPMYMGWRHERVSGKEYEDFIALFIDAVQRRWPD-VLLQFEDFAQSNAMPLLEKYRDELCCFNDDIQGTASVAVGTLLAACKAKNETLGQQKVVFVGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_PSE14 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sfcA PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.887e-23
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN +LLDD  Y+G R +R  G+EY + +  F+ AV+  + + +L+QFEDFA  NA  LLEKY      FNDDIQGTASV +  L++A K    +L  Q+ +F+GA  AG G
Sbjct:  193 DVGTNNRELLDDPMYMGWRHERVSGKEYEDFIALFIDAVQRRWPD-VLLQFEDFAQSNAMPLLEKYRDELCCFNDDIQGTASVAVGTLLAACKAKNETLGQQKVVFVGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_PROMH (NAD-dependent malic enzyme OS=Proteus mirabilis (strain HI4320) GN=sfcA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.887e-23
Identity = 58/115 (50.43%), Postives = 70/115 (60.87%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN + L+D  Y+G R  R  G EY E + EF+ AVK  +   +L+QFEDFA  NA  LL +Y      FNDDIQGTA+V L  LI+A +  G  L DQ   FLGA  AG G
Sbjct:  196 DVGTNNPQRLNDPLYMGWRHPRITGDEYNEFVDEFIQAVKRRW-PNVLLQFEDFAQKNAMPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASRAAGRQLKDQTVAFLGAGSAGCG 309
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_PHOLL (NAD-dependent malic enzyme OS=Photorhabdus luminescens subsp. laumondii GN=sfcA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.887e-23
Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN + L+D  Y+G R  R  G+EY E + EF+ AVK  +   +L+QFEDFA  NA  LL +Y      FNDDIQGTA+V L  LI+A +  G  L DQ   FLGA  AG G
Sbjct:  196 DVGTNNPQRLNDPLYMGWRHPRITGKEYDEFVDEFIQAVKRRW-PNVLLQFEDFAQKNAMPLLNRYRHEICCFNDDIQGTAAVTLGSLIAASRAAGRQLKDQTVTFLGAGSAGCG 309
The following BLAST results are available for this feature:
BLAST of CX291262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHEPA1.693e-2349.57NAD-dependent malic enzyme OS=Shewanella pealeana ... [more]
MAO1_ENTS81.693e-2348.70NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO1_SHEWM2.211e-2349.57NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAO1_SHELP2.211e-2349.57NAD-dependent malic enzyme OS=Shewanella loihica (... [more]
MAO1_ACIAD2.211e-2349.57NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_PSEU22.887e-2348.70NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_PSESM2.887e-2348.70NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_PSE142.887e-2348.70NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_PROMH2.887e-2350.43NAD-dependent malic enzyme OS=Proteus mirabilis (s... [more]
MAO1_PHOLL2.887e-2350.43NAD-dependent malic enzyme OS=Photorhabdus lumines... [more]

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Properties
Property NameValue
Genbank descriptionC03006A03SK OF2 Citrus clementina cDNA clone C03006A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291262 ID=CX291262; Name=CX291262; organism=Citrus clementina; type=EST; length=347bp
TTGATGTGGGGACAAACAATGAGAAGTTGTTGGATGATGAGTTCTACATT
GGGCTCAGGCAGAAGAGGGCTATTGGACAGGAATATGCTGAACTGCTACA
TGAATTCATGACAGCTGTGAAGCANAATTATGGGGAGAGAATTCTCATTC
AGTTTGAAGACTTTGCAAACCACAATGCCTTTGATCTGCTTGAAAAATAT
GGCACTACTCATCTTGTTTTCAATGATGATATTCAGGGGACAGCATCTGT
GGTCCTTGCAGGTCTTATTTCAGCGATGAAATTTCTTGGAGGAAGCTTAG
CCGACCAAAGATTTTTATTCCTTGGTGCACGAGAAGCTGGCACTGGA
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