CX291262

Overview
NameCX291262
Unique NameCX291262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length347
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.771e-23
Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT+N  LL+D  Y+G R +R  G+EY E +  FM AV   + +  LIQFEDFA  NA  LLE+Y   +  FNDD+QGTA+V +  L++A K     L++QR  FLGA  AG G
Sbjct:  193 DVGTDNPNLLEDPMYMGWRHQRIGGEEYTEFVEAFMQAVHRRWPDA-LIQFEDFAQKNAMPLLERYKDQYCCFNDDVQGTAAVTVGSLLAACKAAKTKLSEQRVTFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 3.771e-23
Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN + L D  Y+G R  R  GQEY   + EF+ AVK  + +  LIQFEDFA  NA  LLE+Y      FNDDIQGTA+V +  L++A K     L++QR  FLGA  AG G
Sbjct:  193 DVGTNNPQRLSDPMYMGWRHTRISGQEYDNFVDEFIQAVKRRWPDA-LIQFEDFAQKNAMPLLERYKNKICCFNDDIQGTAAVTVGSLLAACKAAKSKLSEQRISFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.925e-23
Identity = 59/115 (51.30%), Postives = 73/115 (63.48%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN +LL D  Y+G R  R  G+EY E +  F+ AVK  + E +L+QFEDFA  NA  LL KY      FNDDIQGTA+V +  LI+A +  G  L+DQR  FLG+  AG G
Sbjct:  192 DVGTNNSQLLADPMYMGWRNPRITGEEYNEFVDLFIQAVKRRWPE-VLLQFEDFAQTNATPLLNKYRDQICCFNDDIQGTAAVSVGTLIAACQNKGEKLSDQRIAFLGSGSAGCG 305
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_VIBCH (NAD-dependent malic enzyme OS=Vibrio cholerae GN=sfcA PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.432e-23
Identity = 57/115 (49.57%), Postives = 70/115 (60.87%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN + L D  Y+G R  R  G +Y   + EFM AV+  + +  LIQFEDFA  NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L+ QR  FLGA  AG G
Sbjct:  193 DVGTNNPQRLADPMYMGWRHPRITGPDYDNFVEEFMQAVQRRWPDA-LIQFEDFAQKNAMPLLERYKNRVCCFNDDIQGTAAVTVGSLLAACKAAGSQLSQQRITFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_VIBC3 (NAD-dependent malic enzyme OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sfcA PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.432e-23
Identity = 57/115 (49.57%), Postives = 70/115 (60.87%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN + L D  Y+G R  R  G +Y   + EFM AV+  + +  LIQFEDFA  NA  LLE+Y      FNDDIQGTA+V +  L++A K  G  L+ QR  FLGA  AG G
Sbjct:  193 DVGTNNPQRLADPMYMGWRHPRITGPDYDNFVEEFMQAVQRRWPDA-LIQFEDFAQKNAMPLLERYKNRVCCFNDDIQGTAAVTVGSLLAACKAAGSQLSQQRITFLGAGSAGCG 306
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.432e-23
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R    EY   + EF+ AVK  + + IL+QFEDFA  NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCG 309
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.432e-23
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R    EY   + EF+ AVK  + + IL+QFEDFA  NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCG 309
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.432e-23
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R    EY   + EF+ AVK  + + IL+QFEDFA  NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCG 309
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.432e-23
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R    EY   + EF+ AVK  + + IL+QFEDFA  NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCG 309
[Close]
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.432e-23
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 3 
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN++LL+D  Y+G R  R    EY   + EF+ AVK  + + IL+QFEDFA  NA  LL +Y      FNDDIQGTA+V +  LI+A +  G  L++Q+ +FLGA  AG G
Sbjct:  196 DVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCG 309
The following BLAST results are available for this feature:
BLAST of CX291262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHESH3.771e-2348.70NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO11_PHOPR3.771e-2350.43NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_PSYIN4.925e-2351.30NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAO1_VIBCH6.432e-2349.57NAD-dependent malic enzyme OS=Vibrio cholerae GN=s... [more]
MAO1_VIBC36.432e-2349.57NAD-dependent malic enzyme OS=Vibrio cholerae sero... [more]
MAO1_SALTY6.432e-2348.70NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI6.432e-2348.70NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV6.432e-2348.70NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB6.432e-2348.70NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALPA6.432e-2348.70NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]

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Properties
Property NameValue
Genbank descriptionC03006A03SK OF2 Citrus clementina cDNA clone C03006A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291262 ID=CX291262; Name=CX291262; organism=Citrus clementina; type=EST; length=347bp
TTGATGTGGGGACAAACAATGAGAAGTTGTTGGATGATGAGTTCTACATT
GGGCTCAGGCAGAAGAGGGCTATTGGACAGGAATATGCTGAACTGCTACA
TGAATTCATGACAGCTGTGAAGCANAATTATGGGGAGAGAATTCTCATTC
AGTTTGAAGACTTTGCAAACCACAATGCCTTTGATCTGCTTGAAAAATAT
GGCACTACTCATCTTGTTTTCAATGATGATATTCAGGGGACAGCATCTGT
GGTCCTTGCAGGTCTTATTTCAGCGATGAAATTTCTTGGAGGAAGCTTAG
CCGACCAAAGATTTTTATTCCTTGGTGCACGAGAAGCTGGCACTGGA
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