CX291297

Overview
NameCX291297
Unique NameCX291297
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length235
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRZT (60 kDa chaperonin OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=groL PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A+S RVA I++ IE    +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRZP (60 kDa chaperonin OS=Streptococcus pneumoniae (strain P1031) GN=groL PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A+S RVA I++ IE    +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRZJ (60 kDa chaperonin OS=Streptococcus pneumoniae (strain JJA) GN=groL PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A+S RVA I++ IE    +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRSV (60 kDa chaperonin OS=Streptococcus sanguinis (strain SK36) GN=groL PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 49/71 (69.01%), Postives = 63/71 (88.73%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A++ RVA I++ IE++  +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAIANRVAVIKSQIESSTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRSA (60 kDa chaperonin OS=Streptococcus sanguis GN=groL PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 49/71 (69.01%), Postives = 63/71 (88.73%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A++ RVA I++ IE++  +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAIANRVAVIKSQIESSTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRR6 (60 kDa chaperonin OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=groL PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A+S RVA I++ IE    +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRPN (60 kDa chaperonin OS=Streptococcus pneumoniae GN=groL PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A+S RVA I++ IE    +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRPJ (60 kDa chaperonin OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=groL PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A+S RVA I++ IE    +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRP7 (60 kDa chaperonin OS=Streptococcus pneumoniae (strain 70585) GN=groL PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A+S RVA I++ IE    +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
[Close]
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_STRP4 (60 kDa chaperonin OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=groL PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1 
Query:   22 DAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234
            +A+S RVA I++ IE    +++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AAVEEG
Sbjct:  338 EAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEG 408
The following BLAST results are available for this feature:
BLAST of CX291297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STRZT6.146e-2170.4260 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRZP6.146e-2170.4260 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRZJ6.146e-2170.4260 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRSV6.146e-2169.0160 kDa chaperonin OS=Streptococcus sanguinis (stra... [more]
CH60_STRSA6.146e-2169.0160 kDa chaperonin OS=Streptococcus sanguis GN=groL... [more]
CH60_STRR66.146e-2170.4260 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRPN6.146e-2170.4260 kDa chaperonin OS=Streptococcus pneumoniae GN=g... [more]
CH60_STRPJ6.146e-2170.4260 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRP76.146e-2170.4260 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRP46.146e-2170.4260 kDa chaperonin OS=Streptococcus pneumoniae sero... [more]

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Properties
Property NameValue
Genbank descriptionC03006D09SK OF2 Citrus clementina cDNA clone C03006D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291297 ID=CX291297; Name=CX291297; organism=Citrus clementina; type=EST; length=235bp
TTCGGCACGAGGAGCACCCAGGATGCAGTGAGCAAACGAGTGGCGCACAT
CAGAACTCTAATTGAGAACGCTGAGCAAGACTATGAAAGGGAGAAGCTTA
ATGAAAGAATTGCTAAACTGTCAGGTGGTGTTGCTGTCATACAGGTTGGA
GCTCAAACTGAGACAGAGCTTAAAGAGAAGAAGTTGAGAGTCGAAGATGC
TCTTAATGCAACAAAGGCTGCAGTTGAGGAAGGTA
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