CX291300

Overview
NameCX291300
Unique NameCX291300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length574
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.427e-54
Identity = 102/166 (61.45%), Postives = 130/166 (78.31%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 513
            FDL+GIPPAPRG PQIEVTFE+D NGIL V AEDKGTG   KITITND+ RL+ EEI+RMV +AE+FAEEDKK+KE+ID RN LE+Y Y++KNQI DK+KL  KL S++K+ +E AV+E +EWL+ +Q A+ ED++ K KE+E +  PII+ +Y  S G P  G E
Sbjct:  482 FDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY-GSAGPPPTGEE 646          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.427e-54
Identity = 97/162 (59.88%), Postives = 128/162 (79.01%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 498
            +FDL+GIPPAPRG PQIEVTFE+D NGIL V AEDKGTG   +I I ND+ RLS E+I+RM+ +AE++A+EDKKVKEK+DA+N LE+Y Y++KNQI DK+KL  KL  ++K+KI  AV EA++WL+ N  AE E + EK  E+E +  PI+T +Y++SGGAP
Sbjct:  490 KFDLTGIPPAPRGVPQIEVTFEIDVNGILKVTAEDKGTGSKNQIVIQNDQNRLSPEDIERMINDAEKYADEDKKVKEKVDAKNELESYAYSLKNQIGDKEKLGAKLSDEDKEKITEAVDEAIKWLESNAEAESEAFNEKKTELEGIVQPIMTKLYEQSGGAP 651          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.864e-54
Identity = 98/163 (60.12%), Postives = 132/163 (80.98%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LSGIPPAPRG PQIEVTF++DANGILNV A+DK TGK  KITITNDKGRLS++EI+RMV+EAE++  +D+  K++I A+N+LE+Y +NMK  I D +KL DK+  ++K KI+    E + WLD NQ+AEK+++E + KE+E+VCNPIIT +YQ +GG PG
Sbjct:  457 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIED-EKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPG 618          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.864e-54
Identity = 100/166 (60.24%), Postives = 130/166 (78.31%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 513
            FDL+GIPPAPRG PQIEVTFE+D NGIL V AEDKGTG   KITITND+ RL+ EEI+RMV +AE+FAEEDKK+KE+ID RN LE+Y Y++KNQI DK+KL  KL S++K+ +E AV+E +EWL+ +Q A+ ED++ K KE+E +  PII+ +Y  +G  P +  E
Sbjct:  483 FDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLYGSAGPPPTSEEE 648          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 2.435e-54
Identity = 100/164 (60.98%), Postives = 130/164 (79.27%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGA 504
            +F+LSGIPPAPRG PQI VTF++D N ILNV AEDK TG+  KITITNDKGRLS+EEI++MV+EAE++  ED++VK+K+DA+N+LE Y YNM+N I D DK+A KL +++K KIE AV  A+ WLD NQ AE E++E+K+KE+E +CNPII  +Y   G   GA
Sbjct:  460 KFELSGIPPAPRGVPQITVTFDIDVNNILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKD-DKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMYXGEGAGMGA 622          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.180e-54
Identity = 101/166 (60.84%), Postives = 130/166 (78.31%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 513
            FDL+GIPPAPRG PQIEVTFE+D NGIL V AEDKGTG   KITITND+ RL+ EEI+RMV +AE+FAEEDK++KE+ID RN LE+Y Y++KNQI DK+KL  KL S++K+ +E AV+E +EWL+ +Q A+ ED++ K KE+E +  PII+ +Y  S G P  G E
Sbjct:  482 FDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKRLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY-GSAGPPPTGEE 646          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.180e-54
Identity = 100/168 (59.52%), Postives = 132/168 (78.57%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP-GAGTE 513
            +FDLSGIPPA RG PQIEVTFE+D NGIL+V AEDK +G  E ITITNDK RLSQ +IDRMV+EA + A+EDK  KE+++A+N+LE Y+Y +KN I DKDK+  K+ESD+K+ IETA+ +AL WLD N SAEKE+++E+ K +E +  PI + +Y  +GG+P GAG +
Sbjct:  484 KFDLSGIPPAQRGVPQIEVTFEMDVNGILHVSAEDKASGSKESITITNDKERLSQADIDRMVKEAADAADEDKAAKERVEAKNTLENYIYQIKNTIGDKDKIGGKIESDDKETIETAISDALSWLDVNSSAEKEEFDEQYKILEKIVQPIFSKLYGAAGGSPNGAGED 651          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.153e-54
Identity = 96/160 (60.00%), Postives = 134/160 (83.75%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG 492
            +F+LSGIPPAPRG PQI V F++DANG LNV AEDK TG+  KITITNDKGRLS+EEI++MV+EAE++  ED++ K+K++A+N+LE Y YNM+N I D +K+A KL +D++ KIE A+++A++WLD NQ AE E++E+K+KE+E++CNPII  +YQ +GG
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGTLNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKD-EKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQGAGG 622          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.424e-54
Identity = 99/164 (60.37%), Postives = 136/164 (82.93%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGA 504
            +F+LSGIPPAPRG PQI V F++DANGILNV AEDK TG+  KITITNDKGRLS+EEI+RMV+EAE++  ED+++K+K++A+N+LE Y YNM+N I D DK+  +L + +K +IE A+ EA++WLD+NQ AE +++E+K+KE+E++CNPII  +YQ  GGA GA
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKD-DKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQ--GGAGGA 624          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.061e-53
Identity = 98/163 (60.12%), Postives = 130/163 (79.75%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGKS +ITITNDKGRLS+EEI+RMV EAE++  ED++   +I +RN+LE+Y YN++N + D +KLADK ++ +K K+E AV   + WLD++Q A KE+YEE  KE+EAV NPI+  +Y  +GGAPG
Sbjct:  456 KFELAGIPPAPRGVPQIEVTFDIDANGILNVSASDKTTGKSNRITITNDKGRLSKEEIERMVNEAEKYKAEDEEATARITSRNALESYAYNLRNSLTD-EKLADKFDAADKKKLEDAVNSTISWLDNSQEASKEEYEEHQKELEAVANPIMQKLYAGAGGAPG 617          
The following BLAST results are available for this feature:
BLAST of CX291300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_HUMAN1.427e-5461.4578 kDa glucose-regulated protein OS=Homo sapiens G... [more]
GRP78_APLCA1.427e-5459.8878 kDa glucose-regulated protein OS=Aplysia califo... [more]
HSP70_BRUMA1.864e-5460.12Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
GRP78_BOVIN1.864e-5460.2478 kDa glucose-regulated protein OS=Bos taurus GN=... [more]
HSP70_MAIZE2.435e-5460.98Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
GRP78_SPETR3.180e-5460.8478 kDa glucose-regulated protein OS=Spermophilus t... [more]
BIP2_DICDI3.180e-5459.52Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
HSP72_SOLLC4.153e-5460.00Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7C_PETHY5.424e-5460.37Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP71_PUCGR2.061e-5360.12Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]

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Properties
Property NameValue
Genbank descriptionC03006D12SK OF2 Citrus clementina cDNA clone C03006D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291300 ID=CX291300; Name=CX291300; organism=Citrus clementina; type=EST; length=574bp
ATTCGGCACGAGGAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGG
AACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAA
ATGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATC
ACAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGATCGTATGGTTCG
TGAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCG
ATGCTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATT
AATGACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAA
GATTGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGA
GTGCAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTT
TGCAACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGG
TGCTGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAA
GAATCTTTACTTCGATTGACCATA
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