CX291300

Overview
NameCX291300
Unique NameCX291300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length574
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  + D +KL  K+  ++K KI     E + WLD NQ+AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  + D +KL  K+  ++K KI     E + WLD NQ+AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  + D +KL  K+  ++K KI     E + WLD NQ+AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  + D +KL  K+  ++K KI     E + WLD NQ+AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  + D +KL  K+  ++K KI     E + WLD NQ+AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  + D +KL  K+  ++K KI     E + WLD NQ+AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  + D +KL  K+  ++K KI     E + WLD NQ+AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  + D +KL  K+  ++K KI     E + WLD NQ+AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.516e-53
Identity = 97/166 (58.43%), Postives = 134/166 (80.72%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ-RSGGAPGAG 507
            +F+LSGIPPAPRG PQI V F++DANGILNV AEDK TG+  KITITNDKGRLS++EI++MV+EAE++  ED++ K+K+DA+N+LE Y YNM+N I D +K+ +KL  D+K KIE +++ A+EWL+ NQ AE +++E+K+KE+E++CNPII  +YQ    G P AG
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRD-EKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAKMYQGGEAGGPAAG 628          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 4.591e-53
Identity = 94/165 (56.97%), Postives = 132/165 (80.00%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            +F+LSGIPPAPRG PQI V F++DANGILNV AEDK TGK  KITITNDKGRLS+E+I++MV+EAE++  ED++ K+K++A+N+LE Y YNM+N I D +K+ +KL + +K K+E +++EA++WLD NQ  E +++E+K+KE+E+VCNPII  +YQ   G    G
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRD-EKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQGGAGGEAGG 627          
The following BLAST results are available for this feature:
BLAST of CX291300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_SAGOE2.692e-5359.51Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT2.692e-5359.51Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB2.692e-5359.51Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE2.692e-5359.51Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN2.692e-5359.51Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE2.692e-5359.51Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR2.692e-5359.51Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN2.692e-5359.51Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP73_ARATH3.516e-5358.43Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP72_ARATH4.591e-5356.97Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03006D12SK OF2 Citrus clementina cDNA clone C03006D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291300 ID=CX291300; Name=CX291300; organism=Citrus clementina; type=EST; length=574bp
ATTCGGCACGAGGAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGG
AACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAA
ATGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATC
ACAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGATCGTATGGTTCG
TGAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCG
ATGCTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATT
AATGACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAA
GATTGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGA
GTGCAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTT
TGCAACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGG
TGCTGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAA
GAATCTTTACTTCGATTGACCATA
back to top