CX291326

Overview
NameCX291326
Unique NameCX291326
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length532
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF5C_HUMAN (Kinesin heavy chain isoform 5C OS=Homo sapiens GN=KIF5C PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.855e-19
Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 1
Query:   70 KFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            +F ++ S  EIY + IRDLL  S+                  A+  D N   +V   T   V S  ++  ++ +   +R V  T MNE+SSRSH +F + I   N  TE+++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI
Sbjct:  128 EFHIKVSYFEIYLDKIRDLLDVSKTN---------------LAVHEDKNRVPYVKGCTERFVSSPEEVMDVIDEGKANRHVAVTNMNEHSSRSHSIFLINIKQENVETEKKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVI 266          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KI13B_HUMAN (Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.855e-19
Identity = 64/171 (37.43%), Postives = 92/171 (53.80%), Query Frame = 1
Query:   31 IFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVF----TLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            +F+ +Q    +   FK++ S +EIYNE +RDLL   +     L   E+ V G             +V  L+ +   S   I SL+ +  +SR+V  T MNE SSRSH V     T  ++     T  +  G L+L+DLAGSER +++GA GDRLKE   IN+SL++L  VI
Sbjct:  130 LFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDP-KGSRQTLKVREHSVLGP------------YVDGLSKLAATSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVLKITLTHTLYDAKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINESLTTLGLVI 287          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF27_RAT (Kinesin-like protein KIF27 OS=Rattus norvegicus GN=Kif27 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.341e-19
Identity = 63/185 (34.05%), Postives = 97/185 (52.43%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQG---WKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVN---EATE-------QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            R++++IFQ+     + G     FK++ S +E+Y E +RDLL    +              K   I+ D  GNT +       V S+  +  LL+    +R  G TQMNE+SSRSH +FT+ +  V    EATE       + +    + +DLAGSER++++G TG+R KE+  IN  L +L +VI
Sbjct:  112 RAIQEIFQS-----ISGNPNIDFKIKVSYIEVYKEDLRDLLELETSM-------------KDLHIREDEKGNTVIVGAKECQVDSVEDVMGLLQVGNAARHTGTTQMNEHSSRSHAIFTISVCQVGKSAEATEDGEWCSHRHIVSKFHFVDLAGSERVTKTGNTGERFKESIQINSGLLALGNVI 278          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KI21B_MOUSE (Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.341e-19
Identity = 67/199 (33.67%), Postives = 100/199 (50.25%), Query Frame = 1
Query:    1 IPHEARSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFT-----LRIFGVNEATEQQVQGV-----------------LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            I H  R +++  + +Q   V G +FK+ A  LE+YNE I DL  ++R   +   R+          I  DANG  + + +T   + S  ++   L+Q A SR+   TQMN  SSRSH +FT     +R+    +   + V G+                  + +DLAGSERL R+GATG+R KE  +IN  L +L +VI
Sbjct:  117 IAHLFRGIDERKRRAQEKGVTGPEFKVSAQFLELYNEEILDLFDSTRDPDARHRRSN-------IKIHEDANGGIYTTGVTSRLINSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRVCAQPDLVNETVTGLPDGAAPTGTEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVI 308          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF4_XENLA (Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.282e-19
Identity = 63/156 (40.38%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   67 WKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ-VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            W+F ++ S LEIYNE I DLL  +R    D T T         +I+ D      +  LT  DV +     S L Q   SR+V  T MN  SSRSH +FT+ I    E  +    +  L+L+DLAGSER  ++ A GDRLKE  +IN+ L  L +VI
Sbjct:  131 WEFNLKVSYLEIYNEEILDLLYAAR----DKTNT--------ISIREDPKEGIKICGLTERDVKTALDTLSCLEQGNSSRTVASTAMNSQSSRSHAIFTISIEQRKEGDKNNSFRSKLHLVDLAGSERQKKTKAEGDRLKEGISINRGLLCLGNVI 274          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF27_MOUSE (Kinesin-like protein KIF27 OS=Mus musculus GN=Kif27 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.282e-19
Identity = 61/183 (33.33%), Postives = 97/183 (53.01%), Query Frame = 1
Query:   16 RSLEQIFQT-SQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE----------QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            R++++IFQ+ S+   +    FK++ S +E+Y E +RDLL    +              K   I+ D  GNT +       V S+  + SLL+    +R  G TQMNE+SSRSH +FT+ +  V +  E          + +    + +DLAGSER++++G TG+R KE+  IN  L +L +VI
Sbjct:  112 RAIQEIFQSISENPSID---FKIKVSYIEVYKEDLRDLLELETSM-------------KDLHIREDEKGNTVIVGAKECQVESVEDVMSLLQVGNAARHTGTTQMNEHSSRSHAIFTISVCQVEKNAEAAENGEWYSHRHIVSKFHFVDLAGSERVTKTGNTGERFKESIQINSGLLALGNVI 278          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF5A_PONAB (Kinesin heavy chain isoform 5A OS=Pongo abelii GN=KIF5A PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.082e-18
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 1
Query:   70 KFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            +F ++ S  EIY + IRDLL        D+T+T         ++  D N    V   T   V    +I  ++ +   +R V  T MNE+SSRSH +F + I   N  TEQ++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI
Sbjct:  128 EFHIKVSYFEIYLDKIRDLL--------DVTKTN-------LSVHEDKNRVPFVKGCTERFVSGPEEILDVIDEGKSNRHVAVTNMNEHSSRSHSIFLINIKQENMETEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVI 266          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KLP1_CHLRE (Kinesin-like protein KLP1 OS=Chlamydomonas reinhardtii GN=KLP1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.413e-18
Identity = 61/155 (39.35%), Postives = 84/155 (54.19%), Query Frame = 1
Query:   73 FKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIF--GVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            +++  S LEIYNE + DLL  +  G SD             A+  D+N NT+V  LT+V V S  +  +      Q R+     +N  SSRSH VFT+ +     + A+E+ V   LNL+DLAGSER  ++G TG  LKE Q IN+SLS L   +
Sbjct:  133 YRVHVSYLEIYNEQLYDLLGDT-PGTSDAL-----------AVLEDSNSNTYVRGLTLVPVRSEEEALAQFFLGEQGRTTAGHVLNAESSRSHTVFTIHVEMRTSDAASERAVLSKLNLVDLAGSERTKKTGVTGQTLKEAQFINRSLSFLEQTV 275          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: FLA10_CHLRE (Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii GN=FLA10 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.413e-18
Identity = 60/168 (35.71%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   70 KFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ--------------GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            +F +++S LEIYNE +RDLL    +              K+  +K   +   +V DL+     +  +++ +L     +R VG T MN+ SSRSH +FT+ I  + +      Q              G LNL+DLAGSER  ++GATGDRLKE   IN SL++L +VI
Sbjct:  139 EFLVRSSYLEIYNEEVRDLLGKDHS--------------KKMELKESPDRGVYVKDLSQFVCKNYEEMNKVLLAGKDNRQVGATLMNQDSSRSHSIFTITIECIEKLESAAAQKPGAKKDDSNHVRVGKLNLVDLAGSERQDKTGATGDRLKEGIKINLSLTALGNVI 292          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KINH_LOLPE (Kinesin heavy chain OS=Loligo pealeii PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.845e-18
Identity = 59/154 (38.31%), Postives = 87/154 (56.49%), Query Frame = 1
Query:   70 KFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            +F ++ S  EIY + IRDLL        D+T+T         A+  D N    V   T   V S  ++  ++ +   +R V  T MNE+SSRSH VF + +   N  T++++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI
Sbjct:  127 EFHIKISYYEIYLDKIRDLL--------DVTKTN-------LAVHEDKNRVPFVKGATERFVSSPEEVMEVIDEGKNNRHVAVTNMNEHSSRSHSVFLINVKQENVETQKKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVI 265          
The following BLAST results are available for this feature:
BLAST of CX291326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
KIF5C_HUMAN4.855e-1937.66Kinesin heavy chain isoform 5C OS=Homo sapiens GN=... [more]
KI13B_HUMAN4.855e-1937.43Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF... [more]
KIF27_RAT6.341e-1934.05Kinesin-like protein KIF27 OS=Rattus norvegicus GN... [more]
KI21B_MOUSE6.341e-1933.67Kinesin-like protein KIF21B OS=Mus musculus GN=Kif... [more]
KIF4_XENLA8.282e-1940.38Chromosome-associated kinesin KIF4 OS=Xenopus laev... [more]
KIF27_MOUSE8.282e-1933.33Kinesin-like protein KIF27 OS=Mus musculus GN=Kif2... [more]
KIF5A_PONAB1.082e-1838.96Kinesin heavy chain isoform 5A OS=Pongo abelii GN=... [more]
KLP1_CHLRE1.413e-1839.35Kinesin-like protein KLP1 OS=Chlamydomonas reinhar... [more]
FLA10_CHLRE1.413e-1835.71Kinesin-like protein FLA10 OS=Chlamydomonas reinha... [more]
KINH_LOLPE1.845e-1838.31Kinesin heavy chain OS=Loligo pealeii PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC03006G03SK OF2 Citrus clementina cDNA clone C03006G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291326 ID=CX291326; Name=CX291326; organism=Citrus clementina; type=EST; length=532bp
ATTCCGCACGAGGCACGCTCATTGGAGCAGATATTCCAAACCAGTCAGTT
CCTTTTAGTACAGGGCTGGAAGTTCAAAATGCAGGCCTCAATGTTGGAGA
TATATAATGAAACTATCCGTGATCTGTTGTCCACAAGTCGAGCTGGTGGT
TCAGATTTGACACGTACGGAGAATGGTGTTCCTGGAAAGCAGTATGCAAT
TAAACATGATGCAAATGGAAACACTCATGTCAGCGACCTTACGATTGTTG
ATGTCTGTAGCATATCAAAGATTTCATCGCTTTTAAGGCAGGCTGCACAG
AGCAGGTCTGTGGGCAAGACTCAAATGAATGAGTATTCATCAAGAAGCCA
TTTTGTCTTCACGTTACGAATATTTGGAGTAAATGAAGCAACTGAACAAC
AAGTACAGGGTGTCTTAAACCTCATTGATCTAGCTGGAAGTGAGCGATTA
TCAAGAAGTGGGGCGACTGGTGACCGTTTGAAAGAAACTCAGGCCATAAA
TAAAAGCCTGTCATCATTGAGTGATGTTATAT
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