CX291326

Overview
NameCX291326
Unique NameCX291326
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length532
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIFC2_MOUSE (Kinesin-like protein KIFC2 OS=Mus musculus GN=Kifc2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.322e-16
Identity = 60/181 (33.15%), Postives = 93/181 (51.38%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGD---------RLKETQAINKSLSSLSDVI 531
            R+L+ +F+     +  G    +  SM+EIYNE +RDLL+T   G  +      G  G+         G   V+ LT  DV ++  +  +L     +R+   T MN++SSRSH + TL +   +    Q + G L+L+DLAGSER+ ++G             RL+E QAIN+SL +L  V+
Sbjct:  508 RALQLLFRE----MGTGGHHHVTLSMVEIYNEAVRDLLAT---GPPERLVVRQGPAGQ---------GGIQVAGLTHWDVPNLETLHQMLSLGRSNRATAATVMNQHSSRSHALVTLTLRAASPPRPQGITGTLHLVDLAGSERVWKAGVASPVQRDPNGARRLREAQAINRSLLALGGVM 672          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF5_DICDI (Kinesin-related protein 5 OS=Dictyostelium discoideum GN=kif5 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.322e-16
Identity = 57/154 (37.01%), Postives = 83/154 (53.90%), Query Frame = 1
Query:   70 KFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            +F ++ S LEIY E I+DLL+                  KQ  I+   +   +V  LT   V S   I  L++    SRSV KT MN+ SSRSH +  + I     +   + +G LNL+DLAGSE++S++GA G  L++ + IN+SLS L + I
Sbjct:  131 EFTIKCSYLEIYMENIQDLLNPKN--------------NKQLKIRESKSQGIYVEGLTEEYVASEEDIMELIQVGESSRSVAKTNMNQRSSRSHSILIIAI-EQKSSDGSKKRGKLNLVDLAGSEKVSKTGAEGIVLEQAKKINQSLSLLGNCI 269          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF1A_ANOGA (Kinesin-like protein unc-104 OS=Anopheles gambiae GN=unc-104 PE=3 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 1.322e-16
Identity = 59/158 (37.34%), Postives = 86/158 (54.43%), Query Frame = 1
Query:   70 KFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNE----ATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            K+ ++ S +EIY E +RDLL+    G  +L   E+ + G             +V DL+ + V S   I  L+ +  ++R+V  T MNE SSRSH VFT+      +    + E +    ++L+DLAGSER   +GA G RLKE   INKSL++L  VI
Sbjct:  139 KYSVEVSYMEIYCERVRDLLNPKNKG--NLKVREHPLLGP------------YVEDLSKLAVTSYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQKRQDRMTSLETEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVI 282          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF11_HUMAN (Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF11 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.322e-16
Identity = 66/176 (37.50%), Postives = 92/176 (52.27%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEAT---EQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            R+L QIF+    L   G +F ++ S+LEIYNE + DLL+ S      L   ++    +   IK       H  D          ++  +L + A  R+   T MN YSSRSH VF++ I  + E T   E+ V+ G LNL+DLAGSE + RSGA   R +E   IN+SL +L  VI
Sbjct:  138 RTLHQIFEK---LTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKD----------EVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIH-MKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVI 299          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF7_HUMAN (Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.727e-16
Identity = 55/159 (34.59%), Postives = 80/159 (50.31%), Query Frame = 1
Query:   79 MQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE--------QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            +  S LE+Y E  RDLL             E G   +   ++ D  GN  +  +  VDV  + ++ SLL     +R  G T +N  SSRSH VFT+ +     A          Q +    + +DLAGSER+ ++G+TG+RLKE+  IN SL +L +VI
Sbjct:  141 VHVSYLEVYKEEFRDLL-------------EVGTASRDIQLREDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVI 286          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF1B_RAT (Kinesin-like protein KIF1B OS=Rattus norvegicus GN=Kif1b PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.727e-16
Identity = 60/173 (34.68%), Postives = 91/173 (52.60%), Query Frame = 1
Query:   25 EQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            E++F+       +   + ++ S +EIY E +RDLL+    G  +L   E+ + G             +V DL+ + V S + I+ L+    ++R+V  T MNE SSRSH VFT+      +  E  +       ++L+DLAGSER   +GA G RLKE   INKSL++L  VI
Sbjct:  124 EELFEKINDNCNEDMSYSVEVSYMEIYCERVRDLLNPKNKG--NLRVREHPLLGP------------YVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKQDPETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVI 282          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF1A_DROPS (Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura GN=unc-104 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.727e-16
Identity = 60/159 (37.74%), Postives = 88/159 (55.35%), Query Frame = 1
Query:   70 KFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL-----RIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            K+ ++ S +EIY E +RDLL+    G  +L   E+ + G             +V DL+ + V     I  L+ +  ++R+V  T MNE SSRSH VFT+     R   + + T ++V  + +L+DLAGSER   +GA G RLKE   INKSL++L  VI
Sbjct:  139 KYSVEVSYMEIYCERVRDLLNPKNKG--NLRVREHPLLGP------------YVEDLSKLAVTDYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQRRHDTMTDLTTEKVSKI-SLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVI 282          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF1B_MOUSE (Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1b PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.255e-16
Identity = 60/173 (34.68%), Postives = 91/173 (52.60%), Query Frame = 1
Query:   25 EQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            E++F+       +   + ++ S +EIY E +RDLL+    G  +L   E+ + G             +V DL+ + V S + I+ L+    ++R+V  T MNE SSRSH VFT+      +  E  +       ++L+DLAGSER   +GA G RLKE   INKSL++L  VI
Sbjct:  124 EELFEKINDNCNEEMSYSVEVSYMEIYCERVRDLLNPKNKG--NLRVREHPLLGP------------YVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKQDPETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVI 282          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF1B_HUMAN (Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5)

HSP 1 Score: 84.7297 bits (208), Expect = 2.946e-16
Identity = 60/173 (34.68%), Postives = 90/173 (52.02%), Query Frame = 1
Query:   25 EQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            E++F+       +   + ++ S +EIY E +RDLL+    G  +L   E+ + G             +V DL+ + V S + I+ L+    ++R+V  T MNE SSRSH VFT+         E  +       ++L+DLAGSER   +GA G RLKE   INKSL++L  VI
Sbjct:  124 EELFEKINDNCNEEMSYSVEVSYMEIYCERVRDLLNPKNKG--NLRVREHPLLGP------------YVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVI 282          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIP1_YEAST (Kinesin-like protein KIP1 OS=Saccharomyces cerevisiae GN=KIP1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.847e-16
Identity = 59/163 (36.20%), Postives = 87/163 (53.37%), Query Frame = 1
Query:   70 KFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTH--VSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ-------GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            ++ ++ S LE+YNE ++DLLS S      +       P +Q  I  + N N+   V  +  + + S  +  +LL Q +  R V  T+ N+ SSRSH VFT+    V + ++   Q       G LNL+DLAGSE ++RSGA   R +E   INKSL +L  VI
Sbjct:  193 EYSVKISFLELYNENLKDLLSDSEDDDPAVND-----PKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVI 350          
The following BLAST results are available for this feature:
BLAST of CX291326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
KIFC2_MOUSE1.322e-1633.15Kinesin-like protein KIFC2 OS=Mus musculus GN=Kifc... [more]
KIF5_DICDI1.322e-1637.01Kinesin-related protein 5 OS=Dictyostelium discoid... [more]
KIF1A_ANOGA1.322e-1637.34Kinesin-like protein unc-104 OS=Anopheles gambiae ... [more]
KIF11_HUMAN1.322e-1637.50Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF1... [more]
KIF7_HUMAN1.727e-1634.59Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 ... [more]
KIF1B_RAT1.727e-1634.68Kinesin-like protein KIF1B OS=Rattus norvegicus GN... [more]
KIF1A_DROPS1.727e-1637.74Kinesin-like protein unc-104 OS=Drosophila pseudoo... [more]
KIF1B_MOUSE2.255e-1634.68Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1... [more]
KIF1B_HUMAN2.946e-1634.68Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1... [more]
KIP1_YEAST3.847e-1636.20Kinesin-like protein KIP1 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionC03006G03SK OF2 Citrus clementina cDNA clone C03006G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291326 ID=CX291326; Name=CX291326; organism=Citrus clementina; type=EST; length=532bp
ATTCCGCACGAGGCACGCTCATTGGAGCAGATATTCCAAACCAGTCAGTT
CCTTTTAGTACAGGGCTGGAAGTTCAAAATGCAGGCCTCAATGTTGGAGA
TATATAATGAAACTATCCGTGATCTGTTGTCCACAAGTCGAGCTGGTGGT
TCAGATTTGACACGTACGGAGAATGGTGTTCCTGGAAAGCAGTATGCAAT
TAAACATGATGCAAATGGAAACACTCATGTCAGCGACCTTACGATTGTTG
ATGTCTGTAGCATATCAAAGATTTCATCGCTTTTAAGGCAGGCTGCACAG
AGCAGGTCTGTGGGCAAGACTCAAATGAATGAGTATTCATCAAGAAGCCA
TTTTGTCTTCACGTTACGAATATTTGGAGTAAATGAAGCAACTGAACAAC
AAGTACAGGGTGTCTTAAACCTCATTGATCTAGCTGGAAGTGAGCGATTA
TCAAGAAGTGGGGCGACTGGTGACCGTTTGAAAGAAACTCAGGCCATAAA
TAAAAGCCTGTCATCATTGAGTGATGTTATAT
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