CX291359

Overview
NameCX291359
Unique NameCX291359
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CCR4_EMENI (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Emericella nidulans GN=ccr4 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 2
Query:  269 SSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTDA 649
            +S    SVLSYN L D  AT   Y Y PS  LSW +RR+ +L E+  +  DI+CLQE+    + EFF  +L    Y+ ++  + +   +   +   +DGCATFF+  +F  + K  + F + A    DA
Sbjct:  304 TSPDKVSVLSYNTLCDSSATQSHYGYAPSRVLSWEFRRETILNELRAHDPDIICLQEIDQGSYNEFFREQLAYSDYKGVFWPRGRAMGMQEEDAKGVDGCATFFKGSKFILLDKQVINFGQTAVRRPDA 432          
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CCR4_NEOFI (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ccr4 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17
Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = 2
Query:  275 TGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTDA 649
            T   +VLSYN L D  AT   Y Y P+  LSW +RR+ +L E+  + +DI+CLQE+    + E+F  +L  + Y+ +Y  + +   +   +   +DGCATFF+  +F  + K  + F + A    DA
Sbjct:  378 TDKVTVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNELRSHDSDIICLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKASKFILLDKQLINFGQTAVRRPDA 504          
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CCR4_ASPFU (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus fumigatus GN=ccr4 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.872e-17
Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = 2
Query:  275 TGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTDA 649
            T   +VLSYN L D  AT   Y Y P+  LSW +RR+ +L E+  + +DI+CLQE+    + E+F  +L  + Y+ +Y  + +   +   +   +DGCATFF+  +F  + K  + F + A    DA
Sbjct:  324 TDKVTVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNELRSHDSDIICLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKGSKFILLDKQLINFGQTAVRRPDA 450          
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: PDE12_MOUSE (2',5'-phosphodiesterase 12 OS=Mus musculus GN=Pde12 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 60/219 (27.40%), Postives = 100/219 (45.66%), Query Frame = 2
Query:    2 PAAVTRSGGET-WFEVG-RSKTYTPSADDIGHVLKFECVVVDAETKLPVGHPNTLLTSRVIPAPSPSPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSES-----YSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQS 637
            PA+ + S   + W E G   + YTP   DIG  L+  C   + +   P     +L      P       R             H+ +  +++       +SYNIL+D YA +E      Y YC  +AL   YR+  + +E+ GY AD++CLQEV    F +   P L+  G + +++ K +E          G ATF+R+ +F  + ++++ F +A +S
Sbjct:  212 PASSSHSSQPSAWIETGVDERVYTPCNADIGLRLRLHCTPGNGQRFGPSRELESLCPVEAGPGTCTFDHR-------------HLYTK-KVTEDSFIRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQHE----------GLATFYRKSKFRLLSQHDISFQEALKS 406          
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: PDE12_RAT (2',5'-phosphodiesterase 12 OS=Rattus norvegicus GN=Pde12 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 57/207 (27.54%), Postives = 94/207 (45.41%), Query Frame = 2
Query:   35 WFEVG-RSKTYTPSADDIGHVLKFECVVVDAETKLPVGHPNTLLTSRVIPAPSPSPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSES-----YSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQS 637
            W E G   + YTP   DIG  LK  C   + +   P     ++      P       R             H+ +  +++       +SYNIL+D YA +E      Y YC  +AL   YR+  + +E+ GY AD++CLQEV    F +   P L+  G + +++ K +E          G ATF+R+ +F  + ++++ F +A +S
Sbjct:  224 WIETGVDERVYTPCNADIGLRLKLHCTPGNGQRFGPSRELESVCPVEAGPGTCTFDHR-------------HLYTK-KVTEDSFIRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQHE----------GLATFYRKSKFRLLSQHDISFQEALKS 406          
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: ANGE2_MOUSE (Protein angel homolog 2 OS=Mus musculus GN=Angel2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 50/123 (40.65%), Postives = 65/123 (52.85%), Query Frame = 2
Query:  284 FSVLSYNILSD--VYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTD 646
            FSV+SYNILS   +   S  Y +C    L W++R  N+L+EI  + AD++CLQEVQ DH+     P L+  GY   YK KT           DGCA  F+  RFS +    VEF +    L D
Sbjct:  167 FSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMKTG-------RKPDGCAICFKHSRFSLLSVNPVEFCRRDIPLLD 282          
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: ANGE2_HUMAN (Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 49/123 (39.84%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  284 FSVLSYNILSD--VYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTD 646
            FSV+SYNILS   +   S  Y +C    L W++R  N+L+EI  + AD++CLQEVQ DH+     P L+  GY   YK +T           DGCA  F+  +FS +    VEF +   SL D
Sbjct:  167 FSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAEIRPSLESLGYHCEYKMRTG-------RKPDGCAICFKHSKFSLLSVNPVEFFRPDISLLD 282          
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CCR4_ASPNC (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ccr4 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 44/129 (34.11%), Postives = 70/129 (54.26%), Query Frame = 2
Query:  269 SSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTDA 649
            S T   +VLS+N L D  AT   + Y PS  LSW +RR+ +L E+  + +DI+CLQE+    +  FF  +L  + Y+ +Y  + +   +      ++DGCATFF+  +F  + K  + F + A    DA
Sbjct:  296 SPTEKITVLSHNALCDSSATPSHFGYTPSRVLSWEFRRELILSELRSHDSDIICLQEIDQGSYNGFFREQLAYNDYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGSKFILLDKQMINFGQTAVRRPDA 424          
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: ANGE2_BOVIN (Protein angel homolog 2 OS=Bos taurus GN=ANGEL2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 48/123 (39.02%), Postives = 65/123 (52.85%), Query Frame = 2
Query:  284 FSVLSYNILSD--VYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTD 646
            FSV+SYNILS   +   S  Y +C    L W++R  N+L+EI  + AD++CLQEVQ DH+     P L+  GY   YK +T           DGCA  F+  +FS +    VEF +    L D
Sbjct:  167 FSVMSYNILSQDLLEDNSHLYKHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMRTG-------RKPDGCAICFKHSKFSLLSVNPVEFYRRDVPLLD 282          
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CCR4_ENCCU (Probable glucose-repressible alcohol dehydrogenase transcriptional effector homolog OS=Encephalitozoon cuniculi GN=CCR4 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 39/114 (34.21%), Postives = 72/114 (63.16%), Query Frame = 2
Query:  281 TFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELD-KHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEF 619
            T SV ++NILS++YAT  +Y+  PSW ++  +RR+ +L+EI+ Y  DI+CLQE++   F +F+  +L+ +  Y ++   +       +   +DGCA F+RR +F  + ++ ++F
Sbjct:  171 TVSVGTFNILSNIYATRMTYA--PSWVINSEFRREGVLQEIVLYNVDILCLQEIELYSFFDFYKEQLEMRCNYDSIIYPRGRVKSVPDKKNVDGCAIFWRRSKFRLIAQFPIDF 282          
The following BLAST results are available for this feature:
BLAST of CX291359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CCR4_EMENI4.431e-1735.66Glucose-repressible alcohol dehydrogenase transcri... [more]
CCR4_NEOFI7.559e-1734.65Glucose-repressible alcohol dehydrogenase transcri... [more]
CCR4_ASPFU9.872e-1734.65Glucose-repressible alcohol dehydrogenase transcri... [more]
PDE12_MOUSE2.199e-1627.402',5'-phosphodiesterase 12 OS=Mus musculus GN=Pde1... [more]
PDE12_RAT2.872e-1627.542',5'-phosphodiesterase 12 OS=Rattus norvegicus GN... [more]
ANGE2_MOUSE2.872e-1640.65Protein angel homolog 2 OS=Mus musculus GN=Angel2 ... [more]
ANGE2_HUMAN2.872e-1639.84Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 ... [more]
CCR4_ASPNC8.357e-1634.11Glucose-repressible alcohol dehydrogenase transcri... [more]
ANGE2_BOVIN8.357e-1639.02Protein angel homolog 2 OS=Bos taurus GN=ANGEL2 PE... [more]
CCR4_ENCCU1.207e-1434.21Probable glucose-repressible alcohol dehydrogenase... [more]

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Properties
Property NameValue
Genbank descriptionC03007B01SK OF2 Citrus clementina cDNA clone C03007B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291359 ID=CX291359; Name=CX291359; organism=Citrus clementina; type=EST; length=687bp
TCCTGCTGCAGTTACGCGGAGTGGAGGTGAAACTTGGTTTGAAGTTGGAC
GATCAAAAACATACACTCCATCAGCCGATGATATTGGCCATGTCCTGAAG
TTTGAGTGTGTCGTAGTAGATGCAGAAACCAAACTCCCCGTGGGGCATCC
CAACACTCTGTTGACTTCCCGAGTCATTCCTGCCCCTTCTCCTAGTCCTC
GTCGCTTGTTCCCGGTCAATGGATCTGACATGAACATGATGGGGCATATC
GATTCTGATGGCCGTATTTCAAGCACTGGAACTTTTTCTGTGCTCTCATA
CAATATTTTGTCTGATGTGTACGCAACAAGCGAATCATATAGTTACTGCC
CTTCATGGGCTCTATCGTGGGCATATCGCAGACAGAATTTGTTGCGGGAA
ATTATTGGCTACCGTGCTGATATAGTTTGTCTTCAGGAGGTTCAAAATGA
TCACTTTGAGGAATTTTTTGCCCCTGAGCTCGACAAACATGGCTATCAAG
CTCTCTATAAGAGAAAAACAAATGAGGTTTACAATGGAAACCCCCATACA
ATCGATGGCTGTGCAACATTTTTCCGTAGAGATAGATTTTCACATGTCAA
AAAATATGAGGTTGAATTTATTAAGGCTGCTCAGTCTTTGACTGATGCTA
TACTTCCAGTGCCCAGAAGAAGATGCTTTGAATCGAT
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